RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 C4orf19Q8IY42 314 aa23.58■■□□□ 1.37
TMC6-213ENST00000589933 RPGRIP1Q96KN7 1286 aa23.58■■□□□ 1.37
TMC6-213ENST00000589933 VAV3Q9UKW4 847 aa23.58■■□□□ 1.37
TMC6-213ENST00000589933 ZC3H11AO75152 810 aaKnown RBP eCLIP23.57■■□□□ 1.36
TMC6-213ENST00000589933 CBX2Q14781 532 aaPredicted RBP23.57■■□□□ 1.36
TMC6-213ENST00000589933 NCAPH2Q6IBW4 605 aa23.57■■□□□ 1.36
TMC6-213ENST00000589933 MRPL43Q8N983 215 aaKnown RBP23.57■■□□□ 1.36
TMC6-213ENST00000589933 URGCPQ8TCY9 931 aa23.57■■□□□ 1.36
TMC6-213ENST00000589933 LXNQ9BS40 222 aa23.57■■□□□ 1.36
TMC6-213ENST00000589933 ZSWIM4Q9H7M6 989 aa23.57■■□□□ 1.36
TMC6-213ENST00000589933 STK39Q9UEW8 545 aa23.57■■□□□ 1.36
TMC6-213ENST00000589933 ARID2Q68CP9 1835 aa23.56■■□□□ 1.36
TMC6-213ENST00000589933 HIDE1A8MVS5 230 aa23.56■■□□□ 1.36
TMC6-213ENST00000589933 ZNF623O75123 536 aa23.56■■□□□ 1.36
TMC6-213ENST00000589933 YWHABP31946 246 aaKnown RBP23.56■■□□□ 1.36
TMC6-213ENST00000589933 NPEPPSP55786 919 aa23.56■■□□□ 1.36
TMC6-213ENST00000589933 TRIM29Q14134 588 aa23.56■■□□□ 1.36
TMC6-213ENST00000589933 NOMO2Q5JPE7 1267 aa23.56■■□□□ 1.36
TMC6-213ENST00000589933 VN1R2Q8NFZ6 395 aa23.56■■□□□ 1.36
TMC6-213ENST00000589933 SUSD6Q92537 303 aa23.56■■□□□ 1.36
TMC6-213ENST00000589933 CCDC43Q96MW1 224 aaKnown RBP23.56■■□□□ 1.36
TMC6-213ENST00000589933 DHX33Q9H6R0 707 aaKnown RBP23.56■■□□□ 1.36
TMC6-213ENST00000589933 INPP5FQ9Y2H2 1132 aa23.56■■□□□ 1.36
TMC6-213ENST00000589933 CXCL14O95715 111 aa23.55■■□□□ 1.36
TMC6-213ENST00000589933 SRGAP2CP0DJJ0 459 aa23.55■■□□□ 1.36
TMC6-213ENST00000589933 RBM10P98175 930 aaKnown RBP23.55■■□□□ 1.36
TMC6-213ENST00000589933 NCBP1Q09161 790 aaKnown RBP23.55■■□□□ 1.36
TMC6-213ENST00000589933 XKR9Q5GH70 373 aa23.55■■□□□ 1.36
TMC6-213ENST00000589933 KSR1Q8IVT5 923 aa23.55■■□□□ 1.36
TMC6-213ENST00000589933 FAM193BQ96PV7 902 aaPredicted RBP23.55■■□□□ 1.36
TMC6-213ENST00000589933 AGPAT5Q9NUQ2 364 aa23.55■■□□□ 1.36
TMC6-213ENST00000589933 KANSL3Q9P2N6 904 aa23.55■■□□□ 1.36
TMC6-213ENST00000589933 NR2E1Q9Y466 385 aa23.55■■□□□ 1.36
TMC6-213ENST00000589933 C2orf71A6NGG8 1288 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 NT5C1B-RDH14C9J2C7 533 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 ERLIN2O94905 339 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 HOXD11P31277 338 aaPredicted RBP23.54■■□□□ 1.36
TMC6-213ENST00000589933 AK2P54819 239 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 ITIH3Q06033 890 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 KCNC3Q14003 757 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 PCBP1Q15365 356 aaKnown RBP eCLIP23.54■■□□□ 1.366e-7■■■■■ 35.7
TMC6-213ENST00000589933 HFE2Q6ZVN8 426 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 ZBTB33Q86T24 672 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 POTEDQ86YR6 584 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 VPS52Q8N1B4 723 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 CNNM3Q8NE01 707 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 OXER1Q8TDS5 423 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 PRPF31Q8WWY3 499 aaKnown RBP23.54■■□□□ 1.36
TMC6-213ENST00000589933 HAS1Q92839 578 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 LPPQ93052 612 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 TMEM143Q96AN5 459 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 NECTIN4Q96NY8 510 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 MTRQ99707 1265 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 IFT122Q9HBG6 1241 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 PCDHB2Q9Y5E7 798 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 MUC6Q6W4X9 2439 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 CNTNAP2Q9UHC6 1331 aa23.54■■□□□ 1.36
TMC6-213ENST00000589933 LAMTOR4Q0VGL1 99 aa23.53■■□□□ 1.36
TMC6-213ENST00000589933 MXD4Q14582 209 aaPredicted RBP23.53■■□□□ 1.36
TMC6-213ENST00000589933 EMC2Q15006 297 aa23.53■■□□□ 1.36
TMC6-213ENST00000589933 LONRF3Q496Y0 759 aa23.53■■□□□ 1.36
TMC6-213ENST00000589933 TRIM67Q6ZTA4 783 aa23.53■■□□□ 1.36
TMC6-213ENST00000589933 DDX53Q86TM3 631 aaKnown RBP23.53■■□□□ 1.36
TMC6-213ENST00000589933 TPH2Q8IWU9 490 aa23.53■■□□□ 1.36
TMC6-213ENST00000589933 SUGP1Q8IWZ8 645 aaKnown RBP23.53■■□□□ 1.36
TMC6-213ENST00000589933 S1PR5Q9H228 398 aa23.53■■□□□ 1.36
TMC6-213ENST00000589933 TBC1D13Q9NVG8 400 aa23.53■■□□□ 1.36
TMC6-213ENST00000589933 PPP4R2Q9NY27 417 aa23.53■■□□□ 1.36
TMC6-213ENST00000589933 PCDHA12Q9UN75 941 aa23.53■■□□□ 1.36
TMC6-213ENST00000589933 TECTAO75443 2155 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.52■■□□□ 1.36
TMC6-213ENST00000589933 ZXDAP98168 799 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 TFDP1Q14186 410 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 SYCE2Q6PIF2 218 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 BMP8AQ7Z5Y6 402 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 PBXIP1Q96AQ6 731 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 IGSF21Q96ID5 467 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 DYDC2Q96IM9 177 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 APOL5Q9BWW9 433 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 GBP3Q9H0R5 595 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 NRDE2Q9H7Z3 1164 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 RSAD1Q9HA92 442 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 UBN1Q9NPG3 1134 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 GJB4Q9NTQ9 266 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 DZANK1Q9NVP4 752 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 RGL1Q9NZL6 768 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 HCFC2Q9Y5Z7 792 aa23.52■■□□□ 1.36
TMC6-213ENST00000589933 TMEM221A6NGB7 291 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 M0R296 226 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 CLASP2O75122 1294 aaKnown RBP23.51■■□□□ 1.35
TMC6-213ENST00000589933 OFD1O75665 1012 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 AXLP30530 894 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 MTHFRP42898 656 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 CYP4A11Q02928 519 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 CTTNQ14247 550 aaKnown RBP23.51■■□□□ 1.35
TMC6-213ENST00000589933 CALCRLQ16602 461 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 FERMT3Q86UX7 667 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 PPFIBP1Q86W92 1011 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 RNF149Q8NC42 400 aa23.51■■□□□ 1.35
TMC6-213ENST00000589933 RIPOR3Q96MK2 946 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms