RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 FDXACB1Q9BRP7 624 aaPredicted RBP20.2■□□□□ 0.82
CXXC1-211ENST00000589548 GCOM2Q9BZD3 368 aaPredicted RBP20.2■□□□□ 0.82
CXXC1-211ENST00000589548 UNC45AQ9H3U1 944 aa20.2■□□□□ 0.82
CXXC1-211ENST00000589548 KCNK12Q9HB15 430 aa20.2■□□□□ 0.82
CXXC1-211ENST00000589548 C6orf50Q9HD87 102 aa20.2■□□□□ 0.82
CXXC1-211ENST00000589548 FAM105AQ9NUU6 356 aa20.2■□□□□ 0.82
CXXC1-211ENST00000589548 EPG5Q9HCE0 2579 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 IGKV6-21A0A0C4DH24 114 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 NARSO43776 548 aaKnown RBP20.19■□□□□ 0.82
CXXC1-211ENST00000589548 N4BP1O75113 896 aaKnown RBP20.19■□□□□ 0.82
CXXC1-211ENST00000589548 OFD1O75665 1012 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 RCAN1P53805 252 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 GLB1LQ6UWU2 654 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 OTOP3Q7RTS5 596 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 ZNF280BQ86YH2 543 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 SIX5Q8N196 739 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 DTWD2Q8NBA8 298 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 ACSF2Q96CM8 615 aaPredicted RBP20.19■□□□□ 0.82
CXXC1-211ENST00000589548 GBP3Q9H0R5 595 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 PIN4Q9Y237 131 aaKnown RBP20.19■□□□□ 0.82
CXXC1-211ENST00000589548 DOCK6Q96HP0 2047 aa20.19■□□□□ 0.82
CXXC1-211ENST00000589548 LILRB3O75022 631 aa20.18■□□□□ 0.82
CXXC1-211ENST00000589548 SSBP05455 408 aaKnown RBP eCLIP20.18■□□□□ 0.82
CXXC1-211ENST00000589548 CNPP09543 421 aaKnown RBP20.18■□□□□ 0.82
CXXC1-211ENST00000589548 MTERF2Q49AM1 385 aa20.18■□□□□ 0.82
CXXC1-211ENST00000589548 RNF20Q5VTR2 975 aa20.18■□□□□ 0.82
CXXC1-211ENST00000589548 PPFIBP1Q86W92 1011 aa20.18■□□□□ 0.82
CXXC1-211ENST00000589548 RSPH1Q8WYR4 309 aa20.18■□□□□ 0.82
CXXC1-211ENST00000589548 SLC5A5Q92911 643 aa20.18■□□□□ 0.82
CXXC1-211ENST00000589548 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
CXXC1-211ENST00000589548 SEPT9Q9UHD8 586 aaPredicted RBP20.18■□□□□ 0.82
CXXC1-211ENST00000589548 DNAH14Q0VDD8 3507 aa20.18■□□□□ 0.82
CXXC1-211ENST00000589548 TDRD15B5MCY1 1934 aaKnown RBP20.17■□□□□ 0.82
CXXC1-211ENST00000589548 NCOR2Q9Y618 2525 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 CACNA1IQ9P0X4 2223 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 GAS7O60861 476 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 ZNF623O75123 536 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 DDHD2O94830 711 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 SFPQP23246 707 aaKnown RBP eCLIP20.17■□□□□ 0.82
CXXC1-211ENST00000589548 AFF1P51825 1210 aaKnown RBP20.17■□□□□ 0.82
CXXC1-211ENST00000589548 JAK3P52333 1124 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 RNASELQ05823 741 aaKnown RBP20.17■□□□□ 0.82
CXXC1-211ENST00000589548 LETM2Q2VYF4 491 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 AGMOQ6ZNB7 445 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 RIT2Q99578 217 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 NIFKQ9BYG3 293 aaKnown RBP20.17■□□□□ 0.82
CXXC1-211ENST00000589548 FBXL21Q9UKT6 434 aa20.17■□□□□ 0.82
CXXC1-211ENST00000589548 NAP1L2Q9ULW6 460 aaPredicted RBP20.17■□□□□ 0.82
CXXC1-211ENST00000589548 CARNS1A5YM72 827 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 KLRC2P26717 231 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 SFNP31947 248 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 TSGA10IPQ3SY00 556 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 LRCH2Q5VUJ6 765 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 KSR1Q8IVT5 923 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 CCDC12Q8WUD4 166 aaPredicted RBP20.16■□□□□ 0.82
CXXC1-211ENST00000589548 RSAD2Q8WXG1 361 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 CCDC136Q96JN2 1154 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 TEKT3Q9BXF9 490 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 NID2Q14112 1375 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 ARID2Q68CP9 1835 aa20.16■□□□□ 0.82
CXXC1-211ENST00000589548 KRBA1A5PL33 1030 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 SPDYE4A6NLX3 237 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 PRPF3O43395 683 aaKnown RBP20.15■□□□□ 0.82
CXXC1-211ENST00000589548 PSMD10O75832 226 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 SKIP12755 728 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 CPA1P15085 419 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 GNA11P29992 359 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 RAB27AP51159 221 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 B3GNT9Q6UX72 402 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 C15orf39Q6ZRI6 1047 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 ZNF410Q86VK4 478 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 RHPN2Q8IUC4 686 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 PHKBQ93100 1093 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 EMILIN2Q9BXX0 1053 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 IGSF9Q9P2J2 1179 aa20.15■□□□□ 0.82
CXXC1-211ENST00000589548 SUCLA2Q9P2R7 463 aaPredicted RBP20.15■□□□□ 0.82
CXXC1-211ENST00000589548 CFHP08603 1231 aa20.14■□□□□ 0.81
CXXC1-211ENST00000589548 CDC42EP1Q00587 391 aa20.14■□□□□ 0.81
CXXC1-211ENST00000589548 XKR3Q5GH77 459 aa20.14■□□□□ 0.81
CXXC1-211ENST00000589548 CATSPER4Q7RTX7 472 aa20.14■□□□□ 0.81
CXXC1-211ENST00000589548 MIER3Q7Z3K6 550 aa20.14■□□□□ 0.81
CXXC1-211ENST00000589548 CMASQ8NFW8 434 aaPredicted RBP20.14■□□□□ 0.81
CXXC1-211ENST00000589548 IFT122Q9HBG6 1241 aa20.14■□□□□ 0.81
CXXC1-211ENST00000589548 MAN1C1Q9NR34 630 aa20.14■□□□□ 0.81
CXXC1-211ENST00000589548 PCDHB2Q9Y5E7 798 aa20.14■□□□□ 0.81
CXXC1-211ENST00000589548 MYH15Q9Y2K3 1946 aa20.14■□□□□ 0.81
CXXC1-211ENST00000589548 MAFO75444 373 aaPredicted RBP20.13■□□□□ 0.81
CXXC1-211ENST00000589548 NTRK3Q16288 839 aa20.13■□□□□ 0.81
CXXC1-211ENST00000589548 RDM1Q8NG50 284 aa20.13■□□□□ 0.81
CXXC1-211ENST00000589548 NLRP4Q96MN2 994 aa20.13■□□□□ 0.81
CXXC1-211ENST00000589548 AGPAT5Q9NUQ2 364 aa20.13■□□□□ 0.81
CXXC1-211ENST00000589548 MARCH5Q9NX47 278 aa20.13■□□□□ 0.81
CXXC1-211ENST00000589548 VPS54Q9P1Q0 977 aa20.13■□□□□ 0.81
CXXC1-211ENST00000589548 MIA3Q5JRA6 1907 aa20.13■□□□□ 0.81
CXXC1-211ENST00000589548 GPR179Q6PRD1 2367 aa20.13■□□□□ 0.81
CXXC1-211ENST00000589548 FRYLO94915 3013 aa20.12■□□□□ 0.81
CXXC1-211ENST00000589548 CCDC196A0A1B0GTZ2 297 aa20.12■□□□□ 0.81
CXXC1-211ENST00000589548 DNM2P50570 870 aa20.12■□□□□ 0.81
CXXC1-211ENST00000589548 USP11P51784 963 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms