RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 COL4A3BPQ9Y5P4 624 aa26.61■■□□□ 1.85
LSM7-205ENST00000589532 ZNF623O75123 536 aa26.6■■□□□ 1.85
LSM7-205ENST00000589532 XBP1P17861 261 aa26.6■■□□□ 1.85
LSM7-205ENST00000589532 NR5A1Q13285 461 aa26.6■■□□□ 1.85
LSM7-205ENST00000589532 ANKRD54Q6NXT1 300 aa26.6■■□□□ 1.85
LSM7-205ENST00000589532 HFE2Q6ZVN8 426 aa26.6■■□□□ 1.85
LSM7-205ENST00000589532 C4orf19Q8IY42 314 aa26.6■■□□□ 1.85
LSM7-205ENST00000589532 LPPQ93052 612 aa26.6■■□□□ 1.85
LSM7-205ENST00000589532 NAP1L4Q99733 375 aaKnown RBP26.6■■□□□ 1.85
LSM7-205ENST00000589532 INO80BQ9C086 356 aaPredicted RBP26.6■■□□□ 1.85
LSM7-205ENST00000589532 FAM105AQ9NUU6 356 aa26.6■■□□□ 1.85
LSM7-205ENST00000589532 ORC3Q9UBD5 711 aaPredicted RBP26.6■■□□□ 1.85
LSM7-205ENST00000589532 DKC1O60832 514 aaKnown RBP eCLIP26.59■■□□□ 1.85
LSM7-205ENST00000589532 BCAR1P56945 870 aa26.59■■□□□ 1.85
LSM7-205ENST00000589532 EPHA7Q15375 998 aa26.59■■□□□ 1.85
LSM7-205ENST00000589532 TWF2Q6IBS0 349 aaKnown RBP26.59■■□□□ 1.85
LSM7-205ENST00000589532 SLC7A3Q8WY07 619 aa26.59■■□□□ 1.85
LSM7-205ENST00000589532 GTF3C6Q969F1 213 aa26.59■■□□□ 1.85
LSM7-205ENST00000589532 KIF2CQ99661 725 aa26.59■■□□□ 1.85
LSM7-205ENST00000589532 C2orf71A6NGG8 1288 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 B4GALT3O60512 393 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 RFC5P40937 340 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 RAB27AP51159 221 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 KRT17Q04695 432 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 ME3Q16798 604 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 CATSPER4Q7RTX7 472 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 MRPL43Q8N983 215 aaKnown RBP26.58■■□□□ 1.85
LSM7-205ENST00000589532 BCL7CQ8WUZ0 217 aaPredicted RBP26.58■■□□□ 1.85
LSM7-205ENST00000589532 CEP170P1Q96L14 293 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 ZSCAN31Q96LW9 406 aaPredicted RBP26.58■■□□□ 1.85
LSM7-205ENST00000589532 MINDY3Q9H8M7 445 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 TBC1D13Q9NVG8 400 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 RGL1Q9NZL6 768 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 LIMCH1Q9UPQ0 1083 aa26.58■■□□□ 1.85
LSM7-205ENST00000589532 NT5C1B-RDH14C9J2C7 533 aa26.57■■□□□ 1.84
LSM7-205ENST00000589532 YWHABP31946 246 aaKnown RBP26.57■■□□□ 1.84
LSM7-205ENST00000589532 SMC1AQ14683 1233 aaKnown RBP26.57■■□□□ 1.84
LSM7-205ENST00000589532 TMC7Q7Z402 723 aa26.57■■□□□ 1.84
LSM7-205ENST00000589532 NSUN7Q8NE18 718 aaKnown RBP26.57■■□□□ 1.84
LSM7-205ENST00000589532 EDAQ92838 391 aa26.57■■□□□ 1.84
LSM7-205ENST00000589532 ZBP1Q9H171 429 aa26.57■■□□□ 1.84
LSM7-205ENST00000589532 HCFC2Q9Y5Z7 792 aa26.57■■□□□ 1.84
LSM7-205ENST00000589532 SRGAP2BP0DMP2 458 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 SKIP12755 728 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 TECP42680 631 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 MCM2P49736 904 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 POLGP54098 1239 aaPredicted RBP26.56■■□□□ 1.84
LSM7-205ENST00000589532 LLGL2Q6P1M3 1020 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 NECAB1Q8N987 351 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 PRPF31Q8WWY3 499 aaKnown RBP26.56■■□□□ 1.84
LSM7-205ENST00000589532 PSPC1Q8WXF1 523 aaKnown RBP26.56■■□□□ 1.84
LSM7-205ENST00000589532 WASF1Q92558 559 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 TMEM143Q96AN5 459 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 DYDC2Q96IM9 177 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 NRDE2Q9H7Z3 1164 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 XPNPEP1Q9NQW7 623 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 ZDBF2Q9HCK1 2354 aa26.56■■□□□ 1.84
LSM7-205ENST00000589532 WNT7AO00755 349 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 ZC3H11AO75152 810 aaKnown RBP eCLIP26.55■■□□□ 1.842e-9■□□□□ 8.9
LSM7-205ENST00000589532 OFD1O75665 1012 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 HOXB8P17481 243 aaPredicted RBP26.55■■□□□ 1.84
LSM7-205ENST00000589532 HOXA11P31270 313 aaPredicted RBP26.55■■□□□ 1.84
LSM7-205ENST00000589532 KRT2P35908 639 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 ST3GAL1Q11201 340 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 EMC2Q15006 297 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 NOMO2Q5JPE7 1267 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 UBXN11Q5T124 520 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 NCAPH2Q6IBW4 605 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 GLB1LQ6UWU2 654 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 AGMOQ6ZNB7 445 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 EXOC8Q8IYI6 725 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 VN1R3Q9BXE9 311 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 SH2B1Q9NRF2 756 aaPredicted RBP26.55■■□□□ 1.84
LSM7-205ENST00000589532 BMP2KQ9NSY1 1161 aaPredicted RBP26.55■■□□□ 1.84
LSM7-205ENST00000589532 IRAK3Q9Y616 596 aa26.55■■□□□ 1.84
LSM7-205ENST00000589532 ZBTB39O15060 712 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 GAS2O43903 313 aaKnown RBP26.54■■□□□ 1.84
LSM7-205ENST00000589532 ALDH7A1P49419 539 aaKnown RBP26.54■■□□□ 1.84
LSM7-205ENST00000589532 LAMTOR4Q0VGL1 99 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 LONRF3Q496Y0 759 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 SRGAP1Q7Z6B7 1085 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 MRPL10Q7Z7H8 261 aaKnown RBP26.54■■□□□ 1.84
LSM7-205ENST00000589532 SLFN12Q8IYM2 578 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 CASP10Q92851 521 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 TMEM169Q96HH4 297 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 IGSF21Q96ID5 467 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 ZSWIM4Q9H7M6 989 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 CDH22Q9UJ99 828 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 PCDHB2Q9Y5E7 798 aa26.54■■□□□ 1.84
LSM7-205ENST00000589532 DENND4AQ7Z401 1863 aa26.53■■□□□ 1.84
LSM7-205ENST00000589532 KMT2EQ8IZD2 1858 aa26.53■■□□□ 1.84
LSM7-205ENST00000589532 CLASP2O75122 1294 aaKnown RBP26.53■■□□□ 1.84
LSM7-205ENST00000589532 LYPLA2O95372 231 aa26.53■■□□□ 1.84
LSM7-205ENST00000589532 GALTP07902 379 aa26.53■■□□□ 1.84
LSM7-205ENST00000589532 CYP4A11Q02928 519 aa26.53■■□□□ 1.84
LSM7-205ENST00000589532 CTTNQ14247 550 aaKnown RBP26.53■■□□□ 1.84
LSM7-205ENST00000589532 BMP8AQ7Z5Y6 402 aa26.53■■□□□ 1.84
LSM7-205ENST00000589532 FERMT3Q86UX7 667 aa26.53■■□□□ 1.84
LSM7-205ENST00000589532 RPGRIP1Q96KN7 1286 aa26.53■■□□□ 1.84
LSM7-205ENST00000589532 DNAJB4Q9UDY4 337 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms