RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 GPRC5CQ9NQ84 441 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.05■■□□□ 1.28
MBD3-205ENST00000589064 FAM105AQ9NUU6 356 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 REV3LO60673 3130 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 FGF18O76093 207 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 LAG3P18627 525 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 GLRA2P23416 452 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 CAPSQ13938 189 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 LARP1BQ659C4 914 aaKnown RBP23.05■■□□□ 1.28
MBD3-205ENST00000589064 UHRF1Q96T88 793 aaPredicted RBP23.05■■□□□ 1.28
MBD3-205ENST00000589064 CUL9Q8IWT3 2517 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 ZNF623O75123 536 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 POU5F1BQ06416 359 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 HYAL1Q12794 435 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 IL17AQ16552 155 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 RILPL1Q5EBL4 403 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 HAUS3Q68CZ6 603 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 LRRC43Q8N309 656 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 NECAB3Q96P71 396 aaPredicted RBP23.04■■□□□ 1.28
MBD3-205ENST00000589064 IGFLR1Q9H665 355 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 PCDHB2Q9Y5E7 798 aa23.04■■□□□ 1.28
MBD3-205ENST00000589064 MEIS3P2A8K0S8 358 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 INO80B-WBP1J3KQ70 363 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 GTF2F1P35269 517 aaKnown RBP eCLIP23.03■■□□□ 1.288e-7■□□□□ 10.4
MBD3-205ENST00000589064 PBX3P40426 434 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 RAB27AP51159 221 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 UBXN11Q5T124 520 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 PADI6Q6TGC4 694 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 KCNT2Q6UVM3 1135 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 IGSF22Q8N9C0 903 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 MICAL1Q8TDZ2 1067 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 PABPC5Q96DU9 382 aaKnown RBP23.03■■□□□ 1.28
MBD3-205ENST00000589064 CLDND1Q9NY35 253 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 KIAA1024Q9UPX6 916 aa23.03■■□□□ 1.28
MBD3-205ENST00000589064 SPTBN5Q9NRC6 3674 aaKnown RBP23.02■■□□□ 1.28
MBD3-205ENST00000589064 ARHGEF35A5YM69 484 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 H3BQ06 376 aaPredicted RBP23.02■■□□□ 1.28
MBD3-205ENST00000589064 LAD1O00515 517 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 ERLIN2O94905 339 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 MUTP22033 750 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 CSPP1Q1MSJ5 1256 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 LEXMQ3ZCV2 418 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 DTHD1Q6ZMT9 781 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 IFNLR1Q8IU57 520 aaPredicted RBP23.02■■□□□ 1.28
MBD3-205ENST00000589064 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.02■■□□□ 1.28
MBD3-205ENST00000589064 PGBD4Q96DM1 585 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 ZNF558Q96NG5 402 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 RAB34Q9BZG1 259 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 PCDHGC5Q9Y5F6 944 aa23.02■■□□□ 1.28
MBD3-205ENST00000589064 VCANP13611 3396 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 PP2D1A8MPX8 630 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 NCK2O43639 380 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 TSPAN1O60635 241 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 OFD1O75665 1012 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 CDC25AP30304 524 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 UBE3AQ05086 875 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 MBTD1Q05BQ5 628 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 CUL4AQ13619 759 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 COL19A1Q14993 1142 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 MRPL10Q7Z7H8 261 aaKnown RBP23.01■■□□□ 1.27
MBD3-205ENST00000589064 ADGRD2Q7Z7M1 963 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 MCPH1Q8NEM0 835 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 SNX29Q8TEQ0 813 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 CPB2Q96IY4 423 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 INPP5FQ9Y2H2 1132 aa23.01■■□□□ 1.27
MBD3-205ENST00000589064 CYP11B2P19099 503 aa23■■□□□ 1.27
MBD3-205ENST00000589064 PRPHP41219 470 aa23■■□□□ 1.27
MBD3-205ENST00000589064 ERVFC1P60507 584 aa23■■□□□ 1.27
MBD3-205ENST00000589064 PLCB3Q01970 1234 aa23■■□□□ 1.27
MBD3-205ENST00000589064 NCBP1Q09161 790 aaKnown RBP23■■□□□ 1.27
MBD3-205ENST00000589064 PCBP1Q15365 356 aaKnown RBP eCLIP23■■□□□ 1.273e-6■■■■□ 23.3
MBD3-205ENST00000589064 GLB1LQ6UWU2 654 aa23■■□□□ 1.27
MBD3-205ENST00000589064 AGMOQ6ZNB7 445 aa23■■□□□ 1.27
MBD3-205ENST00000589064 RBM23Q86U06 439 aaKnown RBP23■■□□□ 1.27
MBD3-205ENST00000589064 MRPL9Q9BYD2 267 aaKnown RBP23■■□□□ 1.27
MBD3-205ENST00000589064 POLD4Q9HCU8 107 aa23■■□□□ 1.27
MBD3-205ENST00000589064 DDX19AQ9NUU7 478 aaKnown RBP23■■□□□ 1.27
MBD3-205ENST00000589064 SPG21Q9NZD8 308 aa23■■□□□ 1.27
MBD3-205ENST00000589064 STK24Q9Y6E0 443 aa23■■□□□ 1.27
MBD3-205ENST00000589064 RALGAPA2Q2PPJ7 1873 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 LRRIQ4A6NIV6 560 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 TNFRSF10AO00220 468 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 AXLP30530 894 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 AMHR2Q16671 573 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 CTC1Q2NKJ3 1217 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 NOMO2Q5JPE7 1267 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 MRPS27Q92552 414 aaKnown RBP22.99■■□□□ 1.27
MBD3-205ENST00000589064 EIF2AQ9BY44 585 aaKnown RBP22.99■■□□□ 1.27
MBD3-205ENST00000589064 NFKBIZQ9BYH8 718 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 BHMT2Q9H2M3 363 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 TLR9Q9NR96 1032 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 PUF60Q9UHX1 559 aaKnown RBP22.99■■□□□ 1.27
MBD3-205ENST00000589064 TTC28Q96AY4 2481 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 NLRC5Q86WI3 1866 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 MYO7AQ13402 2215 aa22.99■■□□□ 1.27
MBD3-205ENST00000589064 NT5C1B-RDH14C9J2C7 533 aa22.98■■□□□ 1.27
MBD3-205ENST00000589064 LINC01565O15544 149 aa22.98■■□□□ 1.27
MBD3-205ENST00000589064 LTBRP36941 435 aa22.98■■□□□ 1.27
MBD3-205ENST00000589064 ATP2C1P98194 919 aaPredicted RBP22.98■■□□□ 1.27
MBD3-205ENST00000589064 KRT79Q5XKE5 535 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms