RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 BATF3Q9NR55 127 aa12.36□□□□□ -0.43
BCAS3-220ENST00000588720 RAB20Q9NX57 234 aa12.36□□□□□ -0.43
BCAS3-220ENST00000588720 CIB2O75838 187 aa12.36□□□□□ -0.43
BCAS3-220ENST00000588720 CNGA1P29973 690 aa12.36□□□□□ -0.43
BCAS3-220ENST00000588720 CCT5P48643 541 aa12.36□□□□□ -0.43
BCAS3-220ENST00000588720 PNMA5Q96PV4 448 aa12.36□□□□□ -0.43
BCAS3-220ENST00000588720 CAPS2Q9BXY5 557 aa12.36□□□□□ -0.43
BCAS3-220ENST00000588720 RPF1Q9H9Y2 349 aaKnown RBP12.36□□□□□ -0.43
BCAS3-220ENST00000588720 MRPL47Q9HD33 250 aaKnown RBP12.36□□□□□ -0.43
BCAS3-220ENST00000588720 DAAM1Q9Y4D1 1078 aa12.36□□□□□ -0.43
BCAS3-220ENST00000588720 KLRG2A4D1S0 409 aaPredicted RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 KIF22Q14807 665 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 PDCD2Q16342 344 aaPredicted RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 ZC2HC1CQ53FD0 456 aaPredicted RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 ZNF746Q6NUN9 644 aaPredicted RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 CC2D1AQ6P1N0 951 aaPredicted RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 SPATA33Q96N06 139 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 PLCB1Q9NQ66 1216 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 ADARB2Q9NS39 739 aaKnown RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 NFIBO00712 420 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 PALMO75781 387 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 MXRA7P84157 204 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 GIT2Q14161 759 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 ADAT2Q7Z6V5 191 aaKnown RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 GPD1LQ8N335 351 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 SEPT1Q8WYJ6 367 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 RUSC1Q9BVN2 902 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 TBC1D12O60347 775 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 GGPS1O95749 300 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 SNHG28P0DPA3 235 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 UCHL3P15374 230 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 HSPA6P17066 643 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 CYP2C19P33261 490 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 GUCY2FP51841 1108 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 GYS2P54840 703 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 OSTNP61366 133 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 NYAP1Q6ZVC0 841 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 THNSL1Q8IYQ7 743 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 ZNF526Q8TF50 670 aaPredicted RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 SELENOSQ9BQE4 189 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 ZCCHC17Q9NP64 241 aaKnown RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 HSPBP1Q9NZL4 362 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 BCAP29Q9UHQ4 241 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 KIAA0391O15091 583 aaKnown RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 TLR3O15455 904 aaKnown RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 TMEM119Q4V9L6 283 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 NAA35Q5VZE5 725 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 SYTL5Q8TDW5 730 aaPredicted RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 GRK7Q8WTQ7 553 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 IRX2Q9BZI1 471 aaPredicted RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 SEMA6BQ9H3T3 888 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 NXF1Q9UBU9 619 aaKnown RBP12.35□□□□□ -0.43
BCAS3-220ENST00000588720 MRFAP1Q9Y605 127 aa12.35□□□□□ -0.43
BCAS3-220ENST00000588720 FAM86B1E9PN63 330 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 NDC80O14777 642 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 RNF40O75150 1001 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 FAM86B2P0C5J1 330 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 ANXA13P27216 316 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 SOX5P35711 763 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 FMO5P49326 533 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 SNRPFP62306 86 aaKnown RBP12.34□□□□□ -0.43
BCAS3-220ENST00000588720 BFSP1Q12934 665 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 SNAPC2Q13487 334 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 FBXL13Q8NEE6 735 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
BCAS3-220ENST00000588720 CASQ2O14958 399 aaPredicted RBP12.34□□□□□ -0.43
BCAS3-220ENST00000588720 RNF8O76064 485 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 HEXIM1O94992 359 aaKnown RBP12.34□□□□□ -0.43
BCAS3-220ENST00000588720 PHKA2P46019 1235 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 EFNA5P52803 228 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 C2orf54Q08AI8 447 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 RUNDC3BQ96NL0 473 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 BLOC1S4Q9NUP1 217 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.34□□□□□ -0.43
BCAS3-220ENST00000588720 COL18A1P39060 1754 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 SLURP2P0DP57 97 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 PRKCEQ02156 737 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 FIGNQ5HY92 759 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 PLA2G4FQ68DD2 849 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 ENOSF1Q7L5Y1 443 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 MAGOHBQ96A72 148 aaKnown RBP12.34□□□□□ -0.43
BCAS3-220ENST00000588720 MRPL4Q9BYD3 311 aaKnown RBP12.34□□□□□ -0.43
BCAS3-220ENST00000588720 AGO2Q9UKV8 859 aaKnown RBP12.34□□□□□ -0.43
BCAS3-220ENST00000588720 DOT1LQ8TEK3 1739 aa12.34□□□□□ -0.43
BCAS3-220ENST00000588720 TXNP10599 105 aaKnown RBP12.33□□□□□ -0.43
BCAS3-220ENST00000588720 TAOK1Q7L7X3 1001 aa12.33□□□□□ -0.43
BCAS3-220ENST00000588720 RSPH3Q86UC2 560 aa12.33□□□□□ -0.43
BCAS3-220ENST00000588720 APLFQ8IW19 511 aaPredicted RBP12.33□□□□□ -0.43
BCAS3-220ENST00000588720 CYP2W1Q8TAV3 490 aa12.33□□□□□ -0.43
BCAS3-220ENST00000588720 CALR3Q96L12 384 aaKnown RBP12.33□□□□□ -0.43
BCAS3-220ENST00000588720 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.43
BCAS3-220ENST00000588720 PDCD2LQ9BRP1 358 aa12.33□□□□□ -0.43
BCAS3-220ENST00000588720 PLAGL2Q9UPG8 496 aa12.33□□□□□ -0.43
BCAS3-220ENST00000588720 CYP3A4P08684 503 aa12.33□□□□□ -0.44
BCAS3-220ENST00000588720 EPHB4P54760 987 aa12.33□□□□□ -0.44
BCAS3-220ENST00000588720 SLC20A2Q08357 652 aa12.33□□□□□ -0.44
BCAS3-220ENST00000588720 MAP3K21Q5TCX8 1036 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms