RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 DGAT1O75907 488 aa20.08■□□□□ 0.81
HDAC5-209ENST00000588703 ARL2P36404 184 aa20.08■□□□□ 0.81
HDAC5-209ENST00000588703 PBX3P40426 434 aa20.08■□□□□ 0.81
HDAC5-209ENST00000588703 THNSL1Q8IYQ7 743 aa20.08■□□□□ 0.81
HDAC5-209ENST00000588703 LPPQ93052 612 aa20.08■□□□□ 0.81
HDAC5-209ENST00000588703 POLR3CQ9BUI4 534 aaPredicted RBP20.08■□□□□ 0.81
HDAC5-209ENST00000588703 TUFT1Q9NNX1 390 aa20.08■□□□□ 0.81
HDAC5-209ENST00000588703 NOL7Q9UMY1 257 aaKnown RBP20.08■□□□□ 0.81
HDAC5-209ENST00000588703 ZNF623O75123 536 aa20.07■□□□□ 0.8
HDAC5-209ENST00000588703 XRCC6P12956 609 aaKnown RBP eCLIP20.07■□□□□ 0.8
HDAC5-209ENST00000588703 HOXA11P31270 313 aaPredicted RBP20.07■□□□□ 0.8
HDAC5-209ENST00000588703 PTENP60484 403 aa20.07■□□□□ 0.8
HDAC5-209ENST00000588703 UBE3AQ05086 875 aa20.07■□□□□ 0.8
HDAC5-209ENST00000588703 DLX2Q07687 328 aaPredicted RBP20.07■□□□□ 0.8
HDAC5-209ENST00000588703 CAPSQ13938 189 aa20.07■□□□□ 0.8
HDAC5-209ENST00000588703 CSPP1Q1MSJ5 1256 aa20.07■□□□□ 0.8
HDAC5-209ENST00000588703 LONRF3Q496Y0 759 aa20.07■□□□□ 0.8
HDAC5-209ENST00000588703 PTCRAQ6ISU1 281 aaPredicted RBP20.07■□□□□ 0.8
HDAC5-209ENST00000588703 POTEGQ6S5H5 508 aa20.07■□□□□ 0.8
HDAC5-209ENST00000588703 KCNT2Q6UVM3 1135 aa20.07■□□□□ 0.8
HDAC5-209ENST00000588703 EP400NLQ6ZTU2 488 aa20.07■□□□□ 0.8
HDAC5-209ENST00000588703 LINC01565O15544 149 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 NCK2O43639 380 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 USO1O60763 962 aaKnown RBP20.06■□□□□ 0.8
HDAC5-209ENST00000588703 TBX10O75333 385 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 IL9P15248 144 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 GLRA2P23416 452 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 RPA1P27694 616 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 RAB27AP51159 221 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 MXD4Q14582 209 aaPredicted RBP20.06■□□□□ 0.8
HDAC5-209ENST00000588703 UBXN11Q5T124 520 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 IFNLR1Q8IU57 520 aaPredicted RBP20.06■□□□□ 0.8
HDAC5-209ENST00000588703 CCDC43Q96MW1 224 aaKnown RBP20.06■□□□□ 0.8
HDAC5-209ENST00000588703 ZNF558Q96NG5 402 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 IGFLR1Q9H665 355 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 TLR9Q9NR96 1032 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 DBR1Q9UK59 544 aaKnown RBP20.06■□□□□ 0.8
HDAC5-209ENST00000588703 PCDHB6Q9Y5E3 794 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 PCDHB2Q9Y5E7 798 aa20.06■□□□□ 0.8
HDAC5-209ENST00000588703 GRXCR2A6NFK2 248 aa20.05■□□□□ 0.8
HDAC5-209ENST00000588703 FSCN2O14926 492 aa20.05■□□□□ 0.8
HDAC5-209ENST00000588703 SKIP12755 728 aa20.05■□□□□ 0.8
HDAC5-209ENST00000588703 FXR2P51116 673 aaKnown RBP eCLIP20.05■□□□□ 0.81e-6■■□□□ 13.4
HDAC5-209ENST00000588703 ERVFC1P60507 584 aa20.05■□□□□ 0.8
HDAC5-209ENST00000588703 PLCB3Q01970 1234 aa20.05■□□□□ 0.8
HDAC5-209ENST00000588703 MRPL9Q9BYD2 267 aaKnown RBP20.05■□□□□ 0.8
HDAC5-209ENST00000588703 POLR3FQ9H1D9 316 aaPredicted RBP20.05■□□□□ 0.8
HDAC5-209ENST00000588703 LZTS1Q9Y250 596 aa20.05■□□□□ 0.8
HDAC5-209ENST00000588703 TSPAN1O60635 241 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 GJB2P29033 226 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 NRIP1P48552 1158 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 MBTD1Q05BQ5 628 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 POU5F1BQ06416 359 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 PTGDRQ13258 359 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 ADAM15Q13444 863 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 ECM1Q16610 540 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 AGMOQ6ZNB7 445 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 MRPL10Q7Z7H8 261 aaKnown RBP20.04■□□□□ 0.8
HDAC5-209ENST00000588703 SLC39A11Q8N1S5 342 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 ERMNQ8TAM6 284 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 MRPS27Q92552 414 aaKnown RBP20.04■□□□□ 0.8
HDAC5-209ENST00000588703 NACC1Q96RE7 527 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 GPRC5CQ9NQ84 441 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 KIF3AQ9Y496 699 aa20.04■□□□□ 0.8
HDAC5-209ENST00000588703 OFD1O75665 1012 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 ERLIN2O94905 339 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 GLP2RO95838 553 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 PPM1AP35813 382 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 MCM2P49736 904 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 TFDP1Q14186 410 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 AMHR2Q16671 573 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 PUS10Q3MIT2 529 aaKnown RBP20.03■□□□□ 0.8
HDAC5-209ENST00000588703 GLB1LQ6UWU2 654 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 EFHBQ8N7U6 833 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 RSPH1Q8WYR4 309 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 PPP2R3CQ969Q6 453 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 CD320Q9NPF0 282 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 TBC1D13Q9NVG8 400 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 SPG21Q9NZD8 308 aa20.03■□□□□ 0.8
HDAC5-209ENST00000588703 TDRD15B5MCY1 1934 aaKnown RBP20.03■□□□□ 0.8
HDAC5-209ENST00000588703 INO80B-WBP1J3KQ70 363 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 B4GALT3O60512 393 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 BCAR1P56945 870 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 PCBP1Q15365 356 aaKnown RBP eCLIP20.02■□□□□ 0.86e-6■■■■□ 23.8
HDAC5-209ENST00000588703 CLUL1Q15846 466 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 NOMO2Q5JPE7 1267 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 MCTP1Q6DN14 999 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 MAEAQ7L5Y9 396 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 RBM23Q86U06 439 aaKnown RBP20.02■□□□□ 0.8
HDAC5-209ENST00000588703 FAM178BQ8IXR5 827 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 IGSF22Q8N9C0 903 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 MCPH1Q8NEM0 835 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 MICAL1Q8TDZ2 1067 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 CPB2Q96IY4 423 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 NFKBIZQ9BYH8 718 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 NRDE2Q9H7Z3 1164 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.02■□□□□ 0.8
HDAC5-209ENST00000588703 CLEC1BQ9P126 229 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 LRWD1Q9UFC0 647 aa20.02■□□□□ 0.8
HDAC5-209ENST00000588703 INPP5FQ9Y2H2 1132 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms