RNA–Protein interactions for RNA: ENST00000588640.5

GFAP-213, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-213ENST00000588640 KCNH6Q9H252 994 aa20.22■□□□□ 0.83
GFAP-213ENST00000588640 KCNMB3Q9NPA1 279 aa20.22■□□□□ 0.83
GFAP-213ENST00000588640 TSHZ2Q9NRE2 1034 aa20.22■□□□□ 0.83
GFAP-213ENST00000588640 GJB4Q9NTQ9 266 aa20.22■□□□□ 0.83
GFAP-213ENST00000588640 CDH22Q9UJ99 828 aa20.22■□□□□ 0.83
GFAP-213ENST00000588640 COL4A3BPQ9Y5P4 624 aa20.22■□□□□ 0.83
GFAP-213ENST00000588640 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.21■□□□□ 0.83
GFAP-213ENST00000588640 C2orf71A6NGG8 1288 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 MEIS3P2A8K0S8 358 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 MARCH6O60337 910 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 DKC1O60832 514 aaKnown RBP eCLIP20.21■□□□□ 0.83
GFAP-213ENST00000588640 HOXB8P17481 243 aaPredicted RBP20.21■□□□□ 0.83
GFAP-213ENST00000588640 ZXDAP98168 799 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 NHLH1Q02575 133 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 RNASELQ05823 741 aaKnown RBP20.21■□□□□ 0.83
GFAP-213ENST00000588640 BMS1Q14692 1282 aaKnown RBP20.21■□□□□ 0.83
GFAP-213ENST00000588640 ALYREFQ86V81 257 aaKnown RBP20.21■□□□□ 0.83
GFAP-213ENST00000588640 TMEM173Q86WV6 379 aaPredicted RBP20.21■□□□□ 0.83
GFAP-213ENST00000588640 POTEDQ86YR6 584 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 OXER1Q8TDS5 423 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 RSPH1Q8WYR4 309 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 CEP170P1Q96L14 293 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 FAM20AQ96MK3 541 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 LXNQ9BS40 222 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 TRAIPQ9BWF2 469 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 GBP3Q9H0R5 595 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 S1PR5Q9H228 398 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 AGPAT5Q9NUQ2 364 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 TBC1D13Q9NVG8 400 aa20.21■□□□□ 0.83
GFAP-213ENST00000588640 TPRNQ4KMQ1 711 aa20.2■□□□□ 0.82
GFAP-213ENST00000588640 NCAPH2Q6IBW4 605 aa20.2■□□□□ 0.82
GFAP-213ENST00000588640 PPP4R3AQ6IN85 833 aa20.2■□□□□ 0.82
GFAP-213ENST00000588640 ZBTB33Q86T24 672 aa20.2■□□□□ 0.82
GFAP-213ENST00000588640 SUGP1Q8IWZ8 645 aaKnown RBP20.2■□□□□ 0.82
GFAP-213ENST00000588640 VPS52Q8N1B4 723 aa20.2■□□□□ 0.82
GFAP-213ENST00000588640 MRPL43Q8N983 215 aaKnown RBP20.2■□□□□ 0.82
GFAP-213ENST00000588640 AUTS2Q8WXX7 1259 aa20.2■□□□□ 0.82
GFAP-213ENST00000588640 PBXIP1Q96AQ6 731 aa20.2■□□□□ 0.82
GFAP-213ENST00000588640 ZBP1Q9H171 429 aa20.2■□□□□ 0.82
GFAP-213ENST00000588640 IFT122Q9HBG6 1241 aa20.2■□□□□ 0.82
GFAP-213ENST00000588640 WRAP73Q9P2S5 460 aaPredicted RBP20.2■□□□□ 0.82
GFAP-213ENST00000588640 P4HBP07237 508 aaKnown RBP20.19■□□□□ 0.82
GFAP-213ENST00000588640 NOMO2Q5JPE7 1267 aa20.19■□□□□ 0.82
GFAP-213ENST00000588640 CES5AQ6NT32 575 aa20.19■□□□□ 0.82
GFAP-213ENST00000588640 ZNF579Q8NAF0 562 aaKnown RBP20.19■□□□□ 0.82
GFAP-213ENST00000588640 TMEM87AQ8NBN3 555 aa20.19■□□□□ 0.82
GFAP-213ENST00000588640 URGCPQ8TCY9 931 aa20.19■□□□□ 0.82
GFAP-213ENST00000588640 PSPC1Q8WXF1 523 aaKnown RBP20.19■□□□□ 0.82
GFAP-213ENST00000588640 TMEM143Q96AN5 459 aa20.19■□□□□ 0.82
GFAP-213ENST00000588640 NAP1L4Q99733 375 aaKnown RBP20.19■□□□□ 0.82
GFAP-213ENST00000588640 TPCN1Q9ULQ1 816 aa20.19■□□□□ 0.82
GFAP-213ENST00000588640 MYH11P35749 1972 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 FAM205CA6NFA0 338 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 TBX3O15119 743 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 PFKFB2O60825 505 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 CLASP2O75122 1294 aaKnown RBP20.18■□□□□ 0.82
GFAP-213ENST00000588640 SRGAP2CP0DJJ0 459 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 YWHABP31946 246 aaKnown RBP20.18■□□□□ 0.82
GFAP-213ENST00000588640 RFC5P40937 340 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 CYP4A11Q02928 519 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 SIGLEC14Q08ET2 396 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 EMC2Q15006 297 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 PTPN21Q16825 1174 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 BCL7CQ8WUZ0 217 aaPredicted RBP20.18■□□□□ 0.82
GFAP-213ENST00000588640 HAS1Q92839 578 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 PGBD4Q96DM1 585 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 IGSF21Q96ID5 467 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 DHX33Q9H6R0 707 aaKnown RBP20.18■□□□□ 0.82
GFAP-213ENST00000588640 NRDE2Q9H7Z3 1164 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 ORC3Q9UBD5 711 aaPredicted RBP20.18■□□□□ 0.82
GFAP-213ENST00000588640 DNAJB4Q9UDY4 337 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 NR2E1Q9Y466 385 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 PCDHB2Q9Y5E7 798 aa20.18■□□□□ 0.82
GFAP-213ENST00000588640 DOCK8Q8NF50 2099 aa20.17■□□□□ 0.82
GFAP-213ENST00000588640 CARNS1A5YM72 827 aa20.17■□□□□ 0.82
GFAP-213ENST00000588640 CXCL14O95715 111 aa20.17■□□□□ 0.82
GFAP-213ENST00000588640 BMP8AQ7Z5Y6 402 aa20.17■□□□□ 0.82
GFAP-213ENST00000588640 EXOC8Q8IYI6 725 aa20.17■□□□□ 0.82
GFAP-213ENST00000588640 PRPF31Q8WWY3 499 aaKnown RBP20.17■□□□□ 0.82
GFAP-213ENST00000588640 POMKQ9H5K3 350 aa20.17■□□□□ 0.82
GFAP-213ENST00000588640 MINDY3Q9H8M7 445 aa20.17■□□□□ 0.82
GFAP-213ENST00000588640 RGL1Q9NZL6 768 aa20.17■□□□□ 0.82
GFAP-213ENST00000588640 PPME1Q9Y570 386 aa20.17■□□□□ 0.82
GFAP-213ENST00000588640 USP34Q70CQ2 3546 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 GAS2O43903 313 aaKnown RBP20.16■□□□□ 0.82
GFAP-213ENST00000588640 ZNF623O75123 536 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 OFD1O75665 1012 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 ERLIN2O94905 339 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 NEFLP07196 543 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 CTSAP10619 480 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 KRT2P35908 639 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 MRE11P49959 708 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 AK2P54819 239 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 ITIH3Q06033 890 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 LAMTOR4Q0VGL1 99 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 NR5A1Q13285 461 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 CTTNQ14247 550 aaKnown RBP20.16■□□□□ 0.82
GFAP-213ENST00000588640 EPHA7Q15375 998 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 XKR9Q5GH70 373 aa20.16■□□□□ 0.82
GFAP-213ENST00000588640 EARS2Q5JPH6 523 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms