RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 GRXCR2A6NFK2 248 aa24.28■■□□□ 1.48
CIRBP-219ENST00000588411 ATF7P17544 494 aaPredicted RBP24.28■■□□□ 1.48
CIRBP-219ENST00000588411 KRT17Q04695 432 aa24.28■■□□□ 1.48
CIRBP-219ENST00000588411 ZNF174Q15697 407 aa24.28■■□□□ 1.48
CIRBP-219ENST00000588411 KCNT2Q6UVM3 1135 aa24.28■■□□□ 1.48
CIRBP-219ENST00000588411 GLB1LQ6UWU2 654 aa24.28■■□□□ 1.48
CIRBP-219ENST00000588411 PGBD4Q96DM1 585 aa24.28■■□□□ 1.48
CIRBP-219ENST00000588411 KIAA1671Q9BY89 1806 aa24.28■■□□□ 1.48
CIRBP-219ENST00000588411 ERLIN2O94905 339 aa24.27■■□□□ 1.48
CIRBP-219ENST00000588411 IRS1P35568 1242 aa24.27■■□□□ 1.48
CIRBP-219ENST00000588411 RARRES1P49788 294 aa24.27■■□□□ 1.48
CIRBP-219ENST00000588411 PLCB3Q01970 1234 aa24.27■■□□□ 1.48
CIRBP-219ENST00000588411 NCBP1Q09161 790 aaKnown RBP24.27■■□□□ 1.48
CIRBP-219ENST00000588411 LRRC55Q6ZSA7 311 aa24.27■■□□□ 1.48
CIRBP-219ENST00000588411 TLE6Q9H808 572 aa24.27■■□□□ 1.48
CIRBP-219ENST00000588411 SPG21Q9NZD8 308 aa24.27■■□□□ 1.48
CIRBP-219ENST00000588411 MUC3AQ02505 3323 aa24.27■■□□□ 1.48
CIRBP-219ENST00000588411 ZNF623O75123 536 aa24.26■■□□□ 1.47
CIRBP-219ENST00000588411 TECP42680 631 aa24.26■■□□□ 1.47
CIRBP-219ENST00000588411 ALDH7A1P49419 539 aaKnown RBP24.26■■□□□ 1.47
CIRBP-219ENST00000588411 NDUFV1P49821 464 aa24.26■■□□□ 1.47
CIRBP-219ENST00000588411 EFHBQ8N7U6 833 aa24.26■■□□□ 1.47
CIRBP-219ENST00000588411 MRPS27Q92552 414 aaKnown RBP24.26■■□□□ 1.47
CIRBP-219ENST00000588411 XPNPEP1Q9NQW7 623 aa24.26■■□□□ 1.47
CIRBP-219ENST00000588411 IL9P15248 144 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 LTBRP36941 435 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 NRIP1P48552 1158 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 MCM2P49736 904 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 POU5F1BQ06416 359 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 ADAM15Q13444 863 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 HAUS3Q68CZ6 603 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 PIGOQ8TEQ8 1089 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 NACC1Q96RE7 527 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 CDCA3Q99618 268 aaPredicted RBP24.25■■□□□ 1.47
CIRBP-219ENST00000588411 POLR3CQ9BUI4 534 aaPredicted RBP24.25■■□□□ 1.47
CIRBP-219ENST00000588411 PCDHB2Q9Y5E7 798 aa24.25■■□□□ 1.47
CIRBP-219ENST00000588411 U2AF2P26368 475 aaKnown RBP eCLIP24.24■■□□□ 1.47
CIRBP-219ENST00000588411 AXLP30530 894 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 GTF2F1P35269 517 aaKnown RBP eCLIP24.24■■□□□ 1.473e-6■■□□□ 12.9
CIRBP-219ENST00000588411 PTENP60484 403 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 BMS1Q14692 1282 aaKnown RBP24.24■■□□□ 1.47
CIRBP-219ENST00000588411 ADGRD2Q7Z7M1 963 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 CATSPER3Q86XQ3 398 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 FAM178BQ8IXR5 827 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 MCPH1Q8NEM0 835 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 URGCPQ8TCY9 931 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 LPPQ93052 612 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 CCDC51Q96ER9 411 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 MINDY3Q9H8M7 445 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 NGRNQ9NPE2 291 aaKnown RBP24.24■■□□□ 1.47
CIRBP-219ENST00000588411 ENTPD7Q9NQZ7 604 aa24.24■■□□□ 1.47
CIRBP-219ENST00000588411 DBR1Q9UK59 544 aaKnown RBP24.24■■□□□ 1.47
CIRBP-219ENST00000588411 INO80B-WBP1J3KQ70 363 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 USO1O60763 962 aaKnown RBP24.23■■□□□ 1.47
CIRBP-219ENST00000588411 SPATA31C1P0DKV0 1188 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 SRGAP2BP0DMP2 458 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 RPA1P27694 616 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 SSTR3P32745 418 aaPredicted RBP24.23■■□□□ 1.47
CIRBP-219ENST00000588411 ARL2P36404 184 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 RNASELQ05823 741 aaKnown RBP24.23■■□□□ 1.47
CIRBP-219ENST00000588411 SMAD4Q13485 552 aaKnown RBP24.23■■□□□ 1.47
CIRBP-219ENST00000588411 NOMO2Q5JPE7 1267 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 RBM23Q86U06 439 aaKnown RBP24.23■■□□□ 1.47
CIRBP-219ENST00000588411 CNNM3Q8NE01 707 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 TCF25Q9BQ70 676 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 RAB34Q9BZG1 259 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 PRKAG3Q9UGI9 489 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 CD207Q9UJ71 328 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 INPP5FQ9Y2H2 1132 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 STK24Q9Y6E0 443 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 CNTNAP2Q9UHC6 1331 aa24.23■■□□□ 1.47
CIRBP-219ENST00000588411 FSCN2O14926 492 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 LINC01565O15544 149 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 TBX10O75333 385 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 MUTP22033 750 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 ERVFC1P60507 584 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 CLUL1Q15846 466 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 LONRF3Q496Y0 759 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 NOTUMQ6P988 496 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 IFNLR1Q8IU57 520 aaPredicted RBP24.22■■□□□ 1.47
CIRBP-219ENST00000588411 GJD3Q8N144 294 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 SLC39A11Q8N1S5 342 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 TMEM169Q96HH4 297 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 C1QTNF1Q9BXJ1 281 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 NFKBIZQ9BYH8 718 aa24.22■■□□□ 1.47
CIRBP-219ENST00000588411 POLR3FQ9H1D9 316 aaPredicted RBP24.22■■□□□ 1.47
CIRBP-219ENST00000588411 ZC3H11AO75152 810 aaKnown RBP eCLIP24.21■■□□□ 1.47
CIRBP-219ENST00000588411 MED24O75448 989 aa24.21■■□□□ 1.47
CIRBP-219ENST00000588411 HOXA11P31270 313 aaPredicted RBP24.21■■□□□ 1.47
CIRBP-219ENST00000588411 PBX3P40426 434 aa24.21■■□□□ 1.47
CIRBP-219ENST00000588411 FXR2P51116 673 aaKnown RBP eCLIP24.21■■□□□ 1.47
CIRBP-219ENST00000588411 BCAR1P56945 870 aa24.21■■□□□ 1.47
CIRBP-219ENST00000588411 DLX2Q07687 328 aaPredicted RBP24.21■■□□□ 1.47
CIRBP-219ENST00000588411 CAPSQ13938 189 aa24.21■■□□□ 1.47
CIRBP-219ENST00000588411 PLPP4Q5VZY2 271 aa24.21■■□□□ 1.47
CIRBP-219ENST00000588411 ASAP3Q8TDY4 903 aa24.21■■□□□ 1.47
CIRBP-219ENST00000588411 TMX3Q96JJ7 454 aa24.21■■□□□ 1.47
CIRBP-219ENST00000588411 UBN1Q9NPG3 1134 aa24.21■■□□□ 1.47
CIRBP-219ENST00000588411 TBC1D13Q9NVG8 400 aa24.21■■□□□ 1.47
CIRBP-219ENST00000588411 KANSL3Q9P2N6 904 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms