RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 YBX3P16989 372 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 ZBED6P86452 979 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 CACNB1Q02641 598 aaPredicted RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 PPATQ06203 517 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 ITGB3BPQ13352 177 aaPredicted RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 NFIL3Q16649 462 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 VSIG10LQ86VR7 867 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 CEP57Q86XR8 500 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 ACRBPQ8NEB7 543 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 TRIM58Q8NG06 486 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 INPP4AQ96PE3 977 aaPredicted RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 EDEM3Q9BZQ6 932 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 SLC40A1Q9NP59 571 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 TYW1Q9NV66 732 aaKnown RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 TBC1D7Q9P0N9 293 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 FBXO40Q9UH90 709 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 FZD1Q9UP38 647 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 RIPK3Q9Y572 518 aa10.48□□□□□ -0.73
LINC01539-201ENST00000587904 POLR2AP24928 1970 aaKnown RBP10.48□□□□□ -0.73
LINC01539-201ENST00000587904 PFASO15067 1338 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 TTC26A0AVF1 554 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 ARHGEF35A5YM69 484 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 ENO4A6NNW6 628 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 SLC16A3O15427 465 aaKnown RBP10.47□□□□□ -0.73
LINC01539-201ENST00000587904 ZEB2O60315 1214 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 SKAP2O75563 359 aaPredicted RBP10.47□□□□□ -0.73
LINC01539-201ENST00000587904 SMNDC1O75940 238 aaKnown RBP eCLIP10.47□□□□□ -0.73
LINC01539-201ENST00000587904 MCM3P25205 808 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 RPL13P26373 211 aaKnown RBP10.47□□□□□ -0.73
LINC01539-201ENST00000587904 QARSP47897 775 aaKnown RBP10.47□□□□□ -0.73
LINC01539-201ENST00000587904 ALCAMQ13740 583 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 MEA1Q16626 185 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 DBN1Q16643 649 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 CCDC38Q502W7 563 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 ZNF746Q6NUN9 644 aaPredicted RBP10.47□□□□□ -0.73
LINC01539-201ENST00000587904 TOGARAM2Q6ZUX3 1019 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 TRIM42Q8IWZ5 723 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 NELFCDQ8IXH7 590 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 ANKRD13AQ8IZ07 590 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 PIGOQ8TEQ8 1089 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 SENP7Q9BQF6 1050 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 FGFBP2Q9BYJ0 223 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 TSGA10Q9BZW7 698 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 MRPL44Q9H9J2 332 aaKnown RBP10.47□□□□□ -0.73
LINC01539-201ENST00000587904 ZNHIT6Q9NWK9 470 aaKnown RBP10.47□□□□□ -0.73
LINC01539-201ENST00000587904 CYP39A1Q9NYL5 469 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 PCDHGC5Q9Y5F6 944 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 SCN4AP35499 1836 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 NFASCO94856 1347 aa10.47□□□□□ -0.73
LINC01539-201ENST00000587904 GOLGA6L10A6NI86 522 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 SOWAHDA6NJG2 315 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 ADM5C9JUS6 153 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 DKC1O60832 514 aaKnown RBP eCLIP10.46□□□□□ -0.73
LINC01539-201ENST00000587904 PHACTR2O75167 634 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 NR3C2P08235 984 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 MAPTP10636 758 aaKnown RBP10.46□□□□□ -0.73
LINC01539-201ENST00000587904 MYCLP12524 364 aaPredicted RBP10.46□□□□□ -0.73
LINC01539-201ENST00000587904 PAPOLAP51003 745 aaKnown RBP10.46□□□□□ -0.73
LINC01539-201ENST00000587904 CDK17Q00537 523 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 GNPTABQ3T906 1256 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 WDR93Q6P2C0 686 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 MTHFD1LQ6UB35 978 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 RAD9BQ6WBX8 426 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 LBX2Q6XYB7 198 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 ERO1BQ86YB8 467 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 TRIM59Q8IWR1 403 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 DNERQ8NFT8 737 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.73
LINC01539-201ENST00000587904 IWS1Q96ST2 819 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 CAPS2Q9BXY5 557 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 SIK3Q9Y2K2 1263 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 ADGRG1Q9Y653 693 aa10.46□□□□□ -0.73
LINC01539-201ENST00000587904 A0A0G2JLL6 359 aaPredicted RBP10.46□□□□□ -0.74
LINC01539-201ENST00000587904 RBM47A0AV96 593 aaKnown RBP10.46□□□□□ -0.74
LINC01539-201ENST00000587904 TESPA1A2RU30 521 aaPredicted RBP10.46□□□□□ -0.74
LINC01539-201ENST00000587904 CXCL11O14625 94 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 GCNT3O95395 438 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 NR2F2P24468 414 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 COPB2P35606 906 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 RANBP1P43487 201 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 ADAM9Q13443 819 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 PRKG1Q13976 671 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 FRMD5Q7Z6J6 570 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 PRRT2Q7Z6L0 340 aaPredicted RBP10.46□□□□□ -0.74
LINC01539-201ENST00000587904 C4orf19Q8IY42 314 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 SDR16C5Q8N3Y7 309 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 SLC17A8Q8NDX2 589 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 ATL2Q8NHH9 583 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 CDCA5Q96FF9 252 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 AGAP3Q96P47 875 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 METTL14Q9HCE5 456 aaKnown RBP10.46□□□□□ -0.74
LINC01539-201ENST00000587904 WRAP73Q9P2S5 460 aaPredicted RBP10.46□□□□□ -0.74
LINC01539-201ENST00000587904 TRPC6Q9Y210 931 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.46□□□□□ -0.74
LINC01539-201ENST00000587904 SAMM50Q9Y512 469 aa10.46□□□□□ -0.74
LINC01539-201ENST00000587904 GRIN2DO15399 1336 aa10.45□□□□□ -0.74
LINC01539-201ENST00000587904 SPDYE5A6NIY4 337 aa10.45□□□□□ -0.74
LINC01539-201ENST00000587904 LRRIQ3A6PVS8 624 aaPredicted RBP10.45□□□□□ -0.74
LINC01539-201ENST00000587904 RSPH10B2B2RC85 870 aa10.45□□□□□ -0.74
LINC01539-201ENST00000587904 DDX39AO00148 427 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms