RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 TIPINQ9BVW5 301 aa13□□□□□ -0.33
PRKCSH-206ENST00000587509 TRIM6Q9C030 488 aaPredicted RBP13□□□□□ -0.33
PRKCSH-206ENST00000587509 IFT122Q9HBG6 1241 aa13□□□□□ -0.33
PRKCSH-206ENST00000587509 UBN1Q9NPG3 1134 aa13□□□□□ -0.33
PRKCSH-206ENST00000587509 XPNPEP1Q9NQW7 623 aa13□□□□□ -0.33
PRKCSH-206ENST00000587509 DDX19AQ9NUU7 478 aaKnown RBP13□□□□□ -0.33
PRKCSH-206ENST00000587509 KIAA1024Q9UPX6 916 aa13□□□□□ -0.33
PRKCSH-206ENST00000587509 MRPL42Q9Y6G3 142 aaKnown RBP13□□□□□ -0.33
PRKCSH-206ENST00000587509 NLRC5Q86WI3 1866 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 CNTNAP2Q9UHC6 1331 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 VWA3AA6NCI4 1184 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 RFXAPO00287 272 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 NCK2O43639 380 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 LPXNO60711 386 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 FGFR1P11362 822 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 CYP11B2P19099 503 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 FGFR4P22455 802 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 ARL2P36404 184 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 TXLNAP40222 546 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 NAMPTP43490 491 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 PTENP60484 403 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 FAM189BP81408 668 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 UBE3AQ05086 875 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 CAPSQ13938 189 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 BMS1Q14692 1282 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 TMEM132AQ24JP5 1023 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 THNSL1Q8IYQ7 743 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 CRIPAKQ8N1N5 446 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 C4orf32Q8N8J7 132 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 DEPTORQ8TB45 409 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 CALML4Q96GE6 196 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 BHMT2Q9H2M3 363 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 ZSCAN16Q9H4T2 348 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 NSUN3Q9H649 340 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 FAM105AQ9NUU6 356 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 PRMT7Q9NVM4 692 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 KCNG1Q9UIX4 513 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
PRKCSH-206ENST00000587509 ZBTB39O15060 712 aa12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 EYA4O95677 639 aa12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 LONP1P36776 959 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 UBA7P41226 1012 aa12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 EFNA5P52803 228 aa12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 MRPS5P82675 430 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 ZRSR1Q15695 479 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 ASAP3Q8TDY4 903 aa12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 HLA-CQ95604 372 aa12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 ZNF558Q96NG5 402 aa12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 KCND2Q9NZV8 630 aa12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 STK39Q9UEW8 545 aa12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 PUF60Q9UHX1 559 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-206ENST00000587509 STX6O43752 255 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 ZNF623O75123 536 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 CSDE1O75534 798 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 SYT1P21579 422 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 GLRA2P23416 452 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 KRT17Q04695 432 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 RNASELQ05823 741 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 MBTD1Q05BQ5 628 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 MAPK6Q16659 721 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 TJAP1Q5JTD0 557 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 CDCA2Q69YH5 1023 aaPredicted RBP12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 PDE12Q6L8Q7 609 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 MAEAQ7L5Y9 396 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 SPRED2Q7Z698 418 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 ADPGKQ9BRR6 497 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 C17orf75Q9HAS0 396 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 KANSL3Q9P2N6 904 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 PCDHB2Q9Y5E7 798 aa12.97□□□□□ -0.33
PRKCSH-206ENST00000587509 ZMYM2Q9UBW7 1377 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 N4BP3O15049 544 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 TSPAN1O60635 241 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 SRGAP2BP0DMP2 458 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 SF3A1Q15459 793 aaKnown RBP12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 HYIQ5T013 277 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 SLC27A1Q6PCB7 646 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 ZNF598Q86UK7 904 aaKnown RBP12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 CABP7Q86V35 215 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 HELQQ8TDG4 1101 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 RSAD1Q9HA92 442 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 PLAGL2Q9UPG8 496 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 FAM50BQ9Y247 325 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 LZTS1Q9Y250 596 aa12.96□□□□□ -0.33
PRKCSH-206ENST00000587509 TRANK1O15050 2925 aa12.95□□□□□ -0.34
PRKCSH-206ENST00000587509 H0YCG3 227 aa12.95□□□□□ -0.34
PRKCSH-206ENST00000587509 NR1I2O75469 434 aa12.95□□□□□ -0.34
PRKCSH-206ENST00000587509 LINC00271P0C7V0 271 aa12.95□□□□□ -0.34
PRKCSH-206ENST00000587509 ITGA4P13612 1032 aa12.95□□□□□ -0.34
PRKCSH-206ENST00000587509 NCLP19338 710 aaKnown RBP12.95□□□□□ -0.34
PRKCSH-206ENST00000587509 SCP2P22307 547 aa12.95□□□□□ -0.34
PRKCSH-206ENST00000587509 GATMP50440 423 aa12.95□□□□□ -0.34
PRKCSH-206ENST00000587509 NOMO2Q5JPE7 1267 aa12.95□□□□□ -0.34
PRKCSH-206ENST00000587509 CLLU1OSQ5K130 101 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms