RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 USP34Q70CQ2 3546 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 FAM205CA6NFA0 338 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 TMEM221A6NGB7 291 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 M0R296 226 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 CCNT1O60563 726 aaKnown RBP15.68■□□□□ 0.1
ATG4D-206ENST00000586863 GCFC2P16383 781 aaKnown RBP15.68■□□□□ 0.1
ATG4D-206ENST00000586863 SP100P23497 879 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-206ENST00000586863 ALDH7A1P49419 539 aaKnown RBP15.68■□□□□ 0.1
ATG4D-206ENST00000586863 ZXDAP98168 799 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 TRIM67Q6ZTA4 783 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 BCL7CQ8WUZ0 217 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-206ENST00000586863 TMEM143Q96AN5 459 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 TMEM169Q96HH4 297 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 CEP170P1Q96L14 293 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 MFSD14AQ96MC6 490 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 JPH2Q9BR39 696 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-206ENST00000586863 LXNQ9BS40 222 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 INO80BQ9C086 356 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-206ENST00000586863 ZBP1Q9H171 429 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 DHX33Q9H6R0 707 aaKnown RBP15.68■□□□□ 0.1
ATG4D-206ENST00000586863 BMP2KQ9NSY1 1161 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-206ENST00000586863 AGPAT5Q9NUQ2 364 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 TBC1D13Q9NVG8 400 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 INPP5FQ9Y2H2 1132 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 COL4A3BPQ9Y5P4 624 aa15.68■□□□□ 0.1
ATG4D-206ENST00000586863 B4GALT3O60512 393 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 CLASP2O75122 1294 aaKnown RBP15.67■□□□□ 0.1
ATG4D-206ENST00000586863 ZNF623O75123 536 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 P4HBP07237 508 aaKnown RBP15.67■□□□□ 0.1
ATG4D-206ENST00000586863 HOXB8P17481 243 aaPredicted RBP15.67■□□□□ 0.1
ATG4D-206ENST00000586863 CA8P35219 290 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 POLGP54098 1239 aaPredicted RBP15.67■□□□□ 0.1
ATG4D-206ENST00000586863 SPIRE1Q08AE8 756 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 NOMO2Q5JPE7 1267 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 GLB1LQ6UWU2 654 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 VPS52Q8N1B4 723 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 AUTS2Q8WXX7 1259 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 SLC7A3Q8WY07 619 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 CASP10Q92851 521 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 NRDE2Q9H7Z3 1164 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 MINDY3Q9H8M7 445 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 RGL1Q9NZL6 768 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 ORC3Q9UBD5 711 aaPredicted RBP15.67■□□□□ 0.1
ATG4D-206ENST00000586863 MYO15AQ9UKN7 3530 aa15.67■□□□□ 0.1
ATG4D-206ENST00000586863 TBX3O15119 743 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 DKC1O60832 514 aaKnown RBP eCLIP15.66■□□□□ 0.1
ATG4D-206ENST00000586863 OFD1O75665 1012 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 GALTP07902 379 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 SKIP12755 728 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 XBP1P17861 261 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 YWHABP31946 246 aaKnown RBP15.66■□□□□ 0.1
ATG4D-206ENST00000586863 RAB27AP51159 221 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 AK2P54819 239 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 NHLH1Q02575 133 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 NR5A1Q13285 461 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 EMC2Q15006 297 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 EPHA7Q15375 998 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 NCAPH2Q6IBW4 605 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 BMP8AQ7Z5Y6 402 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 C4orf19Q8IY42 314 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 PRPF31Q8WWY3 499 aaKnown RBP15.66■□□□□ 0.1
ATG4D-206ENST00000586863 PSPC1Q8WXF1 523 aaKnown RBP15.66■□□□□ 0.1
ATG4D-206ENST00000586863 IGSF21Q96ID5 467 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 VN1R3Q9BXE9 311 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 KCNH6Q9H252 994 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 DNAJB4Q9UDY4 337 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 PCDHB2Q9Y5E7 798 aa15.66■□□□□ 0.1
ATG4D-206ENST00000586863 DMDP11532 3685 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.65■□□□□ 0.1
ATG4D-206ENST00000586863 ZBTB39O15060 712 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 LARGE1O95461 756 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 CXCL14O95715 111 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 SRGAP2CP0DJJ0 459 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 FDPSP14324 419 aaKnown RBP15.65■□□□□ 0.1
ATG4D-206ENST00000586863 HOXA11P31270 313 aaPredicted RBP15.65■□□□□ 0.1
ATG4D-206ENST00000586863 RFC5P40937 340 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 AFF1P51825 1210 aaKnown RBP15.65■□□□□ 0.1
ATG4D-206ENST00000586863 CYP4A11Q02928 519 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 LAMTOR4Q0VGL1 99 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 CTTNQ14247 550 aaKnown RBP15.65■□□□□ 0.1
ATG4D-206ENST00000586863 AGMOQ6ZNB7 445 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 ALYREFQ86V81 257 aaKnown RBP15.65■□□□□ 0.1
ATG4D-206ENST00000586863 NECAB1Q8N987 351 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 RSPH1Q8WYR4 309 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 TNFRSF25Q93038 417 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 PBXIP1Q96AQ6 731 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 DYDC2Q96IM9 177 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 GBP3Q9H0R5 595 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 POMKQ9H5K3 350 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 PPME1Q9Y570 386 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 DENND4AQ7Z401 1863 aa15.65■□□□□ 0.1
ATG4D-206ENST00000586863 C2orf16Q68DN1 1984 aa15.64■□□□□ 0.09
ATG4D-206ENST00000586863 MARCH6O60337 910 aa15.64■□□□□ 0.09
ATG4D-206ENST00000586863 CTSAP10619 480 aa15.64■□□□□ 0.09
ATG4D-206ENST00000586863 KRT2P35908 639 aa15.64■□□□□ 0.09
ATG4D-206ENST00000586863 SLC11A1P49279 550 aa15.64■□□□□ 0.09
ATG4D-206ENST00000586863 RNASELQ05823 741 aaKnown RBP15.64■□□□□ 0.09
ATG4D-206ENST00000586863 SIGLEC14Q08ET2 396 aa15.64■□□□□ 0.09
ATG4D-206ENST00000586863 PTPN21Q16825 1174 aa15.64■□□□□ 0.09
ATG4D-206ENST00000586863 TPRNQ4KMQ1 711 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms