RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 ZNF598Q86UK7 904 aaKnown RBP12.54□□□□□ -0.4
ACTN4-209ENST00000586538 SMRP1Q8NCR6 262 aa12.54□□□□□ -0.4
ACTN4-209ENST00000586538 HELQQ8TDG4 1101 aa12.54□□□□□ -0.4
ACTN4-209ENST00000586538 DYDC2Q96IM9 177 aa12.54□□□□□ -0.4
ACTN4-209ENST00000586538 ZNF668Q96K58 619 aaPredicted RBP12.54□□□□□ -0.4
ACTN4-209ENST00000586538 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
ACTN4-209ENST00000586538 EIF2AK1Q9BQI3 630 aaKnown RBP12.54□□□□□ -0.4
ACTN4-209ENST00000586538 SH2D3AQ9BRG2 576 aa12.54□□□□□ -0.4
ACTN4-209ENST00000586538 FOXP1Q9H334 677 aaPredicted RBP12.54□□□□□ -0.4
ACTN4-209ENST00000586538 UPF2Q9HAU5 1272 aaKnown RBP12.54□□□□□ -0.4
ACTN4-209ENST00000586538 AGPAT5Q9NUQ2 364 aa12.54□□□□□ -0.4
ACTN4-209ENST00000586538 NOL7Q9UMY1 257 aaKnown RBP12.54□□□□□ -0.4
ACTN4-209ENST00000586538 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
ACTN4-209ENST00000586538 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
ACTN4-209ENST00000586538 PLXNA4Q9HCM2 1894 aa12.54□□□□□ -0.4
ACTN4-209ENST00000586538 TMEM150BA6NC51 233 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 FSCN2O14926 492 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 DCXO43602 365 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 LARGE1O95461 756 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 HOXB8P17481 243 aaPredicted RBP12.53□□□□□ -0.4
ACTN4-209ENST00000586538 FGFR4P22455 802 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 DNAJB1P25685 340 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 IRS1P35568 1242 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 TXKP42681 527 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 TRAPPC10P48553 1259 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 RBM25P49756 843 aaKnown RBP12.53□□□□□ -0.4
ACTN4-209ENST00000586538 NPEPPSP55786 919 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 CYP4A11Q02928 519 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 LAMTOR4Q0VGL1 99 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 CTTNQ14247 550 aaKnown RBP12.53□□□□□ -0.4
ACTN4-209ENST00000586538 DUSP6Q16828 381 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 CLLU1OSQ5K130 101 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 HAUS3Q68CZ6 603 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 RBM23Q86U06 439 aaKnown RBP12.53□□□□□ -0.4
ACTN4-209ENST00000586538 FERMT3Q86UX7 667 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 RNF149Q8NC42 400 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 PRPF31Q8WWY3 499 aaKnown RBP12.53□□□□□ -0.4
ACTN4-209ENST00000586538 CASP10Q92851 521 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 FAM193BQ96PV7 902 aaPredicted RBP12.53□□□□□ -0.4
ACTN4-209ENST00000586538 IFT122Q9HBG6 1241 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 GJB4Q9NTQ9 266 aa12.53□□□□□ -0.4
ACTN4-209ENST00000586538 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 PRR33A8MZF0 331 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 ST18O60284 1047 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 ZC3H11AO75152 810 aaKnown RBP eCLIP12.52□□□□□ -0.41
ACTN4-209ENST00000586538 SLITRK3O94933 977 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 SRGAP2CP0DJJ0 459 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 ATF7P17544 494 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-209ENST00000586538 MUTP22033 750 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 TPRNQ4KMQ1 711 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 NOMO2Q5JPE7 1267 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 EARS2Q5JPH6 523 aaKnown RBP12.52□□□□□ -0.41
ACTN4-209ENST00000586538 PLPP4Q5VZY2 271 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 NOTUMQ6P988 496 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 ADGRD2Q7Z7M1 963 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 SLC39A11Q8N1S5 342 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 MCPH1Q8NEM0 835 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 TMEM143Q96AN5 459 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 MSLNLQ96KJ4 702 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 HSD17B14Q9BPX1 270 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 NFKBIZQ9BYH8 718 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 RAB34Q9BZG1 259 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 TUFT1Q9NNX1 390 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 RGL1Q9NZL6 768 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 ARID2Q68CP9 1835 aa12.52□□□□□ -0.41
ACTN4-209ENST00000586538 JAK2O60674 1132 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 NR1I2O75469 434 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 CSDE1O75534 798 aaKnown RBP12.51□□□□□ -0.41
ACTN4-209ENST00000586538 MCM7P33993 719 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 CA8P35219 290 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 GTF2F1P35269 517 aaKnown RBP eCLIP12.51□□□□□ -0.415e-6■□□□□ 9.2
ACTN4-209ENST00000586538 BCAR1P56945 870 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 DLX2Q07687 328 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-209ENST00000586538 CLUL1Q15846 466 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 ELMSAN1Q6PJG2 1045 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 TMEM184AQ6ZMB5 413 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 LRRC55Q6ZSA7 311 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 PPFIBP1Q86W92 1011 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-209ENST00000586538 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 MTMR9Q96QG7 549 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 NACC1Q96RE7 527 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 TMEM175Q9BSA9 504 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 TRIM6Q9C030 488 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-209ENST00000586538 EPHX3Q9H6B9 360 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 RSAD1Q9HA92 442 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 RNF19AQ9NV58 838 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 WRAP73Q9P2S5 460 aaPredicted RBP12.51□□□□□ -0.41
ACTN4-209ENST00000586538 SSX2IPQ9Y2D8 614 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 PCDHB2Q9Y5E7 798 aa12.51□□□□□ -0.41
ACTN4-209ENST00000586538 MYO7AQ13402 2215 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 FAM205CA6NFA0 338 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 RBAK-RBAKDNI3L0D1 243 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 INO80B-WBP1J3KQ70 363 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 LINC01565O15544 149 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 OR52Z1P0C646 297 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
ACTN4-209ENST00000586538 RARRES1P49788 294 aa12.5□□□□□ -0.41
ACTN4-209ENST00000586538 FOSBP53539 338 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms