RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TMC5Q6UXY8 1006 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 AGMOQ6ZNB7 445 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 ANO5Q75V66 913 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 ETNPPLQ8TBG4 499 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 JAKMIP1Q96N16 626 aaKnown RBP13.38□□□□□ -0.27
BRCA1-225ENST00000586385 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 RNF26Q9BY78 433 aaPredicted RBP13.38□□□□□ -0.27
BRCA1-225ENST00000586385 IFT122Q9HBG6 1241 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 FAM105AQ9NUU6 356 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 SEPT9Q9UHD8 586 aaPredicted RBP13.38□□□□□ -0.27
BRCA1-225ENST00000586385 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 INPP5FQ9Y2H2 1132 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 SNX14Q9Y5W7 946 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 CYP3A7-CYP3A51PA0A087WV96 503 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 N4BP1O75113 896 aaKnown RBP13.37□□□□□ -0.27
BRCA1-225ENST00000586385 MAFO75444 373 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-225ENST00000586385 DDHD2O94830 711 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 CYP3A7P24462 503 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 CA8P35219 290 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 EVCP57679 992 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 ATAT1Q5SQI0 421 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 PLA2G4FQ68DD2 849 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 TWF2Q6IBS0 349 aaKnown RBP13.37□□□□□ -0.27
BRCA1-225ENST00000586385 MIER3Q7Z3K6 550 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 GPR149Q86SP6 731 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
BRCA1-225ENST00000586385 RDM1Q8NG50 284 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 KLHL5Q96PQ7 755 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 SLC26A6Q9BXS9 759 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 MINDY3Q9H8M7 445 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 SUCLA2Q9P2R7 463 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-225ENST00000586385 WRAP73Q9P2S5 460 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-225ENST00000586385 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
BRCA1-225ENST00000586385 PIN4Q9Y237 131 aaKnown RBP13.37□□□□□ -0.27
BRCA1-225ENST00000586385 MYO15AQ9UKN7 3530 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 WDR81Q562E7 1941 aa13.37□□□□□ -0.27
BRCA1-225ENST00000586385 EML1O00423 815 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 CDC45O75419 566 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 CNPP09543 421 aaKnown RBP13.36□□□□□ -0.27
BRCA1-225ENST00000586385 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
BRCA1-225ENST00000586385 RPS6KB1P23443 525 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 PDIA3P30101 505 aaKnown RBP13.36□□□□□ -0.27
BRCA1-225ENST00000586385 HSPA4P34932 840 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 CLCN4P51793 760 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 UBXN11Q5T124 520 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 GLB1LQ6UWU2 654 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 FRMD5Q7Z6J6 570 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 MRPL10Q7Z7H8 261 aaKnown RBP13.36□□□□□ -0.27
BRCA1-225ENST00000586385 ZNF410Q86VK4 478 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 RHPN2Q8IUC4 686 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 CCDC148Q8NFR7 591 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 BICD2Q8TD16 824 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 GBP3Q9H0R5 595 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 CYP26B1Q9NR63 512 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 AGPAT5Q9NUQ2 364 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 FAM186AA6NE01 2351 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 DENND4AQ7Z401 1863 aa13.36□□□□□ -0.27
BRCA1-225ENST00000586385 DDX11L8A8MPP1 907 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 SLC37A4O43826 429 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 EFEMP2O95967 443 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 HOXA11P31270 313 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-225ENST00000586385 CLCN5P51795 746 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 NPEPPSP55786 919 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 CCT2P78371 535 aaKnown RBP13.35□□□□□ -0.27
BRCA1-225ENST00000586385 FGD1P98174 961 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 BLOC1S2Q6QNY1 142 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 CABP7Q86V35 215 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 RSPH1Q8WYR4 309 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 NLRP4Q96MN2 994 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 AIFM3Q96NN9 605 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 SFXN1Q9H9B4 322 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 SH3GLB2Q9NR46 395 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 MARCH5Q9NX47 278 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 PCDHB2Q9Y5E7 798 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 GVINP1Q7Z2Y8 2422 aa13.35□□□□□ -0.27
BRCA1-225ENST00000586385 SPTBN4Q9H254 2564 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
BRCA1-225ENST00000586385 AOC1P19801 751 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 RAB27AP51159 221 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 NLRP5P59047 1200 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 CDC42EP1Q00587 391 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 TOB2Q14106 344 aaPredicted RBP13.34□□□□□ -0.27
BRCA1-225ENST00000586385 GIT2Q14161 759 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 TAS1R1Q7RTX1 841 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 CATSPER4Q7RTX7 472 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 RNF168Q8IYW5 571 aaPredicted RBP13.34□□□□□ -0.27
BRCA1-225ENST00000586385 KCNK12Q9HB15 430 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 VAV3Q9UKW4 847 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 PCDHA4Q9UN74 947 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 VPS13AQ96RL7 3174 aa13.34□□□□□ -0.27
BRCA1-225ENST00000586385 F8W810 466 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 NARSO43776 548 aaKnown RBP13.33□□□□□ -0.28
BRCA1-225ENST00000586385 SKIP12755 728 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 DNM2P50570 870 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 PSMC5P62195 406 aa13.33□□□□□ -0.28
BRCA1-225ENST00000586385 AKAP17AQ02040 695 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms