RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 GARTP22102 1010 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 CNGA1P29973 690 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 TCF7P36402 384 aaPredicted RBP15.46■□□□□ 0.07
LIG3-205ENST00000585941 PRKCIP41743 596 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 SLC26A2P50443 739 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 TUBB4BP68371 445 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 CCL15Q16663 113 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 CELF3Q5SZQ8 465 aaKnown RBP15.46■□□□□ 0.07
LIG3-205ENST00000585941 C10orf76Q5T2E6 689 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 ATRIPQ8WXE1 791 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 BSNDQ8WZ55 320 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 MAP7D2Q96T17 732 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 CBWD1Q9BRT8 395 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 PORCNQ9H237 461 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 MORF4L1Q9UBU8 362 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 TELO2Q9Y4R8 837 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 PLXNA1Q9UIW2 1896 aa15.46■□□□□ 0.06
LIG3-205ENST00000585941 PLXNB2O15031 1838 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 NOP56O00567 594 aaKnown RBP15.45■□□□□ 0.06
LIG3-205ENST00000585941 ZNF263O14978 683 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 PJA2O43164 708 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 SORBS3O60504 671 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 LGR5O75473 907 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 CCDC172P0C7W6 258 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 ACTN1P12814 892 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 FERP16591 822 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 MAGEA1P43355 309 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 NAMPTP43490 491 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 JAM2P57087 298 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 CYP27A1Q02318 531 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 TTLL4Q14679 1199 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 TARBP2Q15633 366 aaKnown RBP15.45■□□□□ 0.06
LIG3-205ENST00000585941 SLC18A3Q16572 532 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 PLPPR4Q7Z2D5 763 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 ZNF526Q8TF50 670 aaPredicted RBP15.45■□□□□ 0.06
LIG3-205ENST00000585941 SCFD2Q8WU76 684 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 ANKRD7Q92527 254 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 PCIF1Q9H4Z3 704 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 KIAA1586Q9HCI6 787 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 CDC23Q9UJX2 597 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 FHOD1Q9Y613 1164 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 MCM3APO60318 1980 aa15.45■□□□□ 0.06
LIG3-205ENST00000585941 ANO9A1A5B4 782 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 EFCAB8A8MWE9 144 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 BTBD19C9JJ37 291 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 GFPT2O94808 682 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 CYP2C8P10632 490 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 ARL2P36404 184 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 STAT1P42224 750 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 NCBP1Q09161 790 aaKnown RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 STRN3Q13033 797 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 LY6KQ17RY6 165 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 CCDC62Q6P9F0 684 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 ZNF467Q7Z7K2 595 aaPredicted RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 VPS36Q86VN1 386 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 DHX37Q8IY37 1157 aaKnown RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 TRIM58Q8NG06 486 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 TMC2Q8TDI7 906 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 BBXQ8WY36 941 aaPredicted RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 SECISBP2LQ93073 1101 aaKnown RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 FBXL18Q96ME1 805 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 PCYT2Q99447 389 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 STK33Q9BYT3 514 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 INTS2Q9H0H0 1204 aaKnown RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 ATP8B3O60423 1300 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 EMSYQ7Z589 1322 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 SIP14410 1827 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 HNRNPDLO14979 420 aaKnown RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 TRIM49P0CI25 452 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 TRIM49CP0CI26 452 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 GTF2H1P32780 548 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 SNRNP35Q16560 246 aaKnown RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 EEPD1Q7L9B9 569 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 IRF2BP2Q7Z5L9 587 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 CEP112Q8N8E3 955 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 RDH13Q8NBN7 331 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 CEP89Q96ST8 783 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 PARK7Q99497 189 aaKnown RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 GPR20Q99678 358 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 JPH2Q9BR39 696 aaPredicted RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 LACRTQ9GZZ8 138 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 APEX2Q9UBZ4 518 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 USP20Q9Y2K6 914 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 DIS3Q9Y2L1 958 aaKnown RBP15.44■□□□□ 0.06
LIG3-205ENST00000585941 IVNS1ABPQ9Y6Y0 642 aa15.44■□□□□ 0.06
LIG3-205ENST00000585941 RCCD1A6NED2 376 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 ANKRD63C9JTQ0 380 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 TACC1O75410 805 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 MAFO75444 373 aaPredicted RBP15.43■□□□□ 0.06
LIG3-205ENST00000585941 ABL1P00519 1130 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 ADSSP30520 456 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 APBA1Q02410 837 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 WHAMMP3Q1A5X7 153 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 ZNF792Q3KQV3 632 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 CBWD6Q4V339 395 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 CBWD3Q5JTY5 395 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 CBWD5Q5RIA9 395 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 SPRYD7Q5W111 196 aa15.43■□□□□ 0.06
LIG3-205ENST00000585941 IQCEQ6IPM2 695 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms