RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 ZNF131P52739 623 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 COASYQ13057 564 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 NEDD9Q14511 834 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 FAM26FQ5R3K3 315 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 ABHD15Q6UXT9 468 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 DYMQ7RTS9 669 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 TMCO2Q7Z6W1 182 aaPredicted RBP13.19□□□□□ -0.3
GGA3-217ENST00000583667 SMYD4Q8IYR2 804 aaPredicted RBP13.19□□□□□ -0.3
GGA3-217ENST00000583667 FBXL6Q8N531 539 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 P2RX5Q93086 422 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 WRAP73Q9P2S5 460 aaPredicted RBP13.19□□□□□ -0.3
GGA3-217ENST00000583667 IMPACTQ9P2X3 320 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 LIMA1Q9UHB6 759 aaKnown RBP13.19□□□□□ -0.3
GGA3-217ENST00000583667 TRPC6Q9Y210 931 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
GGA3-217ENST00000583667 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 CHMP2AO43633 222 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 SSBP05455 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
GGA3-217ENST00000583667 PSAPP07602 524 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 MAPTP10636 758 aaKnown RBP13.18□□□□□ -0.3
GGA3-217ENST00000583667 ATP1A3P13637 1013 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 IDEP14735 1019 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 RFC2P35250 354 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 LRRC63Q05C16 580 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 BMT2Q1RMZ1 405 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 EPM2AIP1Q7L775 607 aaPredicted RBP13.18□□□□□ -0.3
GGA3-217ENST00000583667 APTXQ7Z2E3 356 aaKnown RBP13.18□□□□□ -0.3
GGA3-217ENST00000583667 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
GGA3-217ENST00000583667 TGS1Q96RS0 853 aaKnown RBP13.18□□□□□ -0.3
GGA3-217ENST00000583667 THAP9Q9H5L6 903 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 JPH1Q9HDC5 661 aaPredicted RBP13.18□□□□□ -0.3
GGA3-217ENST00000583667 SAMSN1Q9NSI8 373 aaKnown RBP13.18□□□□□ -0.3
GGA3-217ENST00000583667 TRMT13Q9NUP7 481 aaKnown RBP13.18□□□□□ -0.3
GGA3-217ENST00000583667 SLC9A2Q9UBY0 812 aa13.18□□□□□ -0.3
GGA3-217ENST00000583667 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 RBM47A0AV96 593 aaKnown RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 MED19A0JLT2 244 aaPredicted RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 PRR23AA6NEV1 266 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 H0Y858 1186 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 STBD1O95210 358 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 KRT18P05783 430 aaKnown RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 EEF1GP26641 437 aaKnown RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 RARRES1P49788 294 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 UBASH3AP57075 661 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 SP2Q02086 613 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 NR1I3Q14994 352 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 FSCN1Q16658 493 aaKnown RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 KLHL10Q6JEL2 608 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 MIS18BP1Q6P0N0 1132 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 OTUD6AQ7L8S5 288 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 IRF2BP1Q8IU81 584 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 MYOCDQ8IZQ8 938 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 PIGOQ8TEQ8 1089 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 ATP6V0A1Q93050 837 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 DUSP9Q99956 384 aaKnown RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 REEP2Q9BRK0 252 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 ZBED2Q9BTP6 218 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 XPO4Q9C0E2 1151 aaKnown RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 KATNBL1Q9H079 304 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 SLC39A2Q9NP94 309 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 TLR9Q9NR96 1032 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 IFNKQ9P0W0 207 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 DDX41Q9UJV9 622 aaKnown RBP13.17□□□□□ -0.3
GGA3-217ENST00000583667 CTNND2Q9UQB3 1225 aa13.17□□□□□ -0.3
GGA3-217ENST00000583667 PLXNA3P51805 1871 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 COL4A6Q14031 1691 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 LOXHD1Q8IVV2 1947 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 A0A1B0GTH6 734 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 LINC01553A4QN01 128 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 ARHGEF35A5YM69 484 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 DDX39AO00148 427 aaKnown RBP13.16□□□□□ -0.3
GGA3-217ENST00000583667 BAIAP3O94812 1187 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 FGFR1OPO95684 399 aaKnown RBP13.16□□□□□ -0.3
GGA3-217ENST00000583667 IQCF3P0C7M6 154 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 SUPT20HL2P0C7V6 817 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 CDK11BP21127 795 aaKnown RBP13.16□□□□□ -0.3
GGA3-217ENST00000583667 YWHABP31946 246 aaKnown RBP13.16□□□□□ -0.3
GGA3-217ENST00000583667 VCPP55072 806 aaKnown RBP13.16□□□□□ -0.3
GGA3-217ENST00000583667 ACTR2P61160 394 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 SMAD2Q15796 467 aaKnown RBP13.16□□□□□ -0.3
GGA3-217ENST00000583667 ZCWPW2Q504Y3 356 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 ANKRD40Q6AI12 368 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 METTL7BQ6UX53 244 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 EP400NLQ6ZTU2 488 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 ZC3H3Q8IXZ2 948 aaKnown RBP13.16□□□□□ -0.3
GGA3-217ENST00000583667 BANK1Q8NDB2 785 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 TMEM174Q8WUU8 243 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 KCNN1Q92952 543 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 RUSC1Q9BVN2 902 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 PKD2L1Q9P0L9 805 aa13.16□□□□□ -0.3
GGA3-217ENST00000583667 MAFBQ9Y5Q3 323 aaPredicted RBP13.16□□□□□ -0.3
GGA3-217ENST00000583667 SCN5AQ14524 2016 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms