RNA–Protein interactions for RNA: ENST00000583382.1

CDH8-209, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 1,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-209ENST00000583382 RNF112Q9ULX5 631 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 MYH8P13535 1937 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 PTPRSQ13332 1948 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 TRANK1O15050 2925 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 BAHCC1Q9P281 2608 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 HTR3BO95264 441 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 NBL1P41271 181 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 PHKA1P46020 1223 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 ERVK-21P61565 698 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 PAK2Q13177 524 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 PRAMEF13Q5VWM6 474 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 SLC4A10Q6U841 1118 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 DEFB128Q7Z7B8 93 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 MRPL41Q8IXM3 137 aaKnown RBP5.53□□□□□ -1.52
CDH8-209ENST00000583382 TOP6BLQ8N6T0 577 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 GIMAP7Q8NHV1 300 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 NKD2Q969F2 451 aaPredicted RBP5.53□□□□□ -1.52
CDH8-209ENST00000583382 VWCEQ96DN2 955 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 MRPL38Q96DV4 380 aaKnown RBP5.53□□□□□ -1.52
CDH8-209ENST00000583382 DPH2Q9BQC3 489 aaPredicted RBP5.53□□□□□ -1.52
CDH8-209ENST00000583382 FOXQ1Q9C009 403 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 FTOQ9C0B1 505 aaKnown RBP eCLIP5.53□□□□□ -1.52
CDH8-209ENST00000583382 ABHD16BQ9H3Z7 469 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 DNAJC18Q9H819 358 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 REV1Q9UBZ9 1251 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 RALYQ9UKM9 306 aaKnown RBP5.53□□□□□ -1.52
CDH8-209ENST00000583382 MTUS1Q9ULD2 1270 aa5.53□□□□□ -1.52
CDH8-209ENST00000583382 TPRP12270 2363 aaKnown RBP5.53□□□□□ -1.52
CDH8-209ENST00000583382 COL4A6Q14031 1691 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 PKD1L2Q7Z442 2459 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 TRIP12Q14669 1992 aaPredicted RBP5.52□□□□□ -1.53
CDH8-209ENST00000583382 UPK3BL1B0FP48 263 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 UPK3BL2E5RIL1 263 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 APAF1O14727 1248 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 FLOT1O75955 427 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 CIAO1O76071 339 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 LRIG2O94898 1065 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 PGK2P07205 417 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 NBPF7P0C2Y1 421 aaPredicted RBP5.52□□□□□ -1.53
CDH8-209ENST00000583382 AVPR2P30518 371 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 VCPP55072 806 aaKnown RBP5.52□□□□□ -1.53
CDH8-209ENST00000583382 NKX3-2P78367 333 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 CYP27A1Q02318 531 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 CLCQ05315 142 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 SIGLEC14Q08ET2 396 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 RASGRF1Q13972 1273 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 PUM1Q14671 1186 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDH8-209ENST00000583382 SMAD2Q15796 467 aaKnown RBP5.52□□□□□ -1.53
CDH8-209ENST00000583382 ABCB5Q2M3G0 1257 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 CERKLQ49MI3 558 aaPredicted RBP5.52□□□□□ -1.53
CDH8-209ENST00000583382 TMEM201Q5SNT2 666 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 MAMDC4Q6UXC1 1216 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 CERS3Q8IU89 383 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 RIOX2Q8IUF8 465 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 MCATQ8IVS2 390 aaKnown RBP5.52□□□□□ -1.53
CDH8-209ENST00000583382 SLITRK4Q8IW52 837 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 ADSSL1Q8N142 457 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 MAGEB6Q8N7X4 407 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 KLHDC4Q8TBB5 520 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 TSR2Q969E8 191 aaKnown RBP5.52□□□□□ -1.53
CDH8-209ENST00000583382 NKD1Q969G9 470 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 NSUN4Q96CB9 384 aaKnown RBP5.52□□□□□ -1.53
CDH8-209ENST00000583382 DDX11Q96FC9 970 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 KAZALD1Q96I82 304 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 SAMD11Q96NU1 681 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 TGIF2Q9GZN2 237 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 ACBD3Q9H3P7 528 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 SH2D4AQ9H788 454 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 PCDHB14Q9Y5E9 798 aa5.52□□□□□ -1.53
CDH8-209ENST00000583382 NLRC5Q86WI3 1866 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 TET1Q8NFU7 2136 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 FLT1P17948 1338 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 LCHNA4D1U4 455 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 STXBP3O00186 592 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 B4GALT4O60513 344 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 DNAJA2O60884 412 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 EFCAB14O75071 495 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 SLITRK5O94991 958 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 CST3P01034 146 aaPredicted RBP5.51□□□□□ -1.53
CDH8-209ENST00000583382 ERCC5P28715 1186 aaPredicted RBP5.51□□□□□ -1.53
CDH8-209ENST00000583382 MCM4P33991 863 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 ZXDAP98168 799 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 ACVR2BQ13705 512 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 MVPQ14764 893 aaKnown RBP5.51□□□□□ -1.53
CDH8-209ENST00000583382 LRRFIP1Q32MZ4 808 aaKnown RBP5.51□□□□□ -1.53
CDH8-209ENST00000583382 CCDC144BQ3MJ40 725 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 ZMYM1Q5SVZ6 1142 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 SLC6A19Q695T7 634 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 TATDN1Q6P1N9 297 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 CXCL17Q6UXB2 119 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 NOL8Q76FK4 1167 aaKnown RBP5.51□□□□□ -1.53
CDH8-209ENST00000583382 MAPKAPK5Q8IW41 473 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 ANKRD44Q8N8A2 993 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 SH3RF3Q8TEJ3 882 aaPredicted RBP5.51□□□□□ -1.53
CDH8-209ENST00000583382 TGFBRAP1Q8WUH2 860 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 RMDN1Q96DB5 314 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 RAD9AQ99638 391 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 AP5M1Q9H0R1 490 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 TRPV6Q9H1D0 765 aa5.51□□□□□ -1.53
CDH8-209ENST00000583382 EHMT1Q9H9B1 1298 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms