RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PDIA4P13667 645 aaKnown RBP13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 POU5F1BQ06416 359 aa13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 NCBP1Q09161 790 aaKnown RBP13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 HYIQ5T013 277 aa13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 ZBTB8OSQ8IWT0 167 aa13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 ABI1Q8IZP0 508 aa13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 POLD4Q9HCU8 107 aa13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 RWDD3Q9Y3V2 267 aa13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 MRPL42Q9Y6G3 142 aaKnown RBP13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 COL6A3P12111 3177 aa13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 HOXA2O43364 376 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 TSPAN1O60635 241 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 ZSCAN22P10073 491 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 SKIP12755 728 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 MBTD1Q05BQ5 628 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 PPP2R5AQ15172 486 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 CCDC85BQ15834 202 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 FOXD4L6Q3SYB3 417 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 LONRF3Q496Y0 759 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 TMEM119Q4V9L6 283 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 SPECC1Q5M775 1068 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 SPOUT1Q5T280 376 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 FOXD4L3Q6VB84 417 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 IFNLR1Q8IU57 520 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 KCTD17Q8N5Z5 321 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 DEPTORQ8TB45 409 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 BSNDQ8WZ55 320 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 KIFAP3Q92845 792 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 IFT74Q96LB3 600 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 ZNF396Q96N95 335 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 RUSC1Q9BVN2 902 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 NFKBIZQ9BYH8 718 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 CSRNP2Q9H175 543 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 C2orf40Q9H1Z8 148 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 FAM105AQ9NUU6 356 aa13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-218ENST00000582955 SLC26A4O43511 780 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 LPXNO60711 386 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 EOMESO95936 686 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 F13A1P00488 732 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 PLA2G4BP0C869 781 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 ATF7P17544 494 aaPredicted RBP13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 LIG1P18858 919 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 BMPR1AP36894 532 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 NAMPTP43490 491 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 RAB27AP51159 221 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 GPM6BQ13491 265 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 KARSQ15046 597 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 STK38Q15208 465 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 PCBP1Q15365 356 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 RINT1Q6NUQ1 792 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 NOTUMQ6P988 496 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 NLRC5Q86WI3 1866 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 SYT2Q8N9I0 419 aaPredicted RBP13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 CLP1Q92989 425 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 CPB2Q96IY4 423 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 CLIC6Q96NY7 704 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 TRAIPQ9BWF2 469 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 TMEM117Q9H0C3 514 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 TFIP11Q9UBB9 837 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 SRPRBQ9Y5M8 271 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 MTCH2Q9Y6C9 303 aa13.94□□□□□ -0.18
SMARCE1-218ENST00000582955 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 B4GALT5O43286 388 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 HIP1RO75146 1068 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 RB1P06400 928 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 LINC00271P0C7V0 271 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 PLCG1P19174 1290 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 AXLP30530 894 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 HOXA11P31270 313 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 TXLNAP40222 546 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 RAD51AP2Q09MP3 1159 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 PKP1Q13835 747 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 BECN1Q14457 450 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 DHX8Q14562 1220 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 SLC39A14Q15043 492 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 TMEM132AQ24JP5 1023 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 CLLU1OSQ5K130 101 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 CDCA2Q69YH5 1023 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 C1orf186Q6ZWK4 172 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 ZNF598Q86UK7 904 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 HELQQ8TDG4 1101 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 LPPQ93052 612 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 PGBD4Q96DM1 585 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 DRC1Q96MC2 740 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 CASD1Q96PB1 797 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 C11orf84Q9BUA3 381 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 KIFC3Q9BVG8 833 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 RNF19AQ9NV58 838 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 PRMT7Q9NVM4 692 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 DAXXQ9UER7 740 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 PCDHB2Q9Y5E7 798 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 EYSQ5T1H1 3165 aa13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 FNDC1Q4ZHG4 1894 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-218ENST00000582955 MYH15Q9Y2K3 1946 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 CCDC169A6NNP5 214 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 C5orf67F2Z3F1 127 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 H3BNC9 293 aa13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 ARF4P18085 180 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-218ENST00000582955 POU3F3P20264 500 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms