RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 AKAP17AQ02040 695 aaKnown RBP15.25■□□□□ 0.03
SS18-222ENST00000582792 NTRK3Q16288 839 aa15.25■□□□□ 0.03
SS18-222ENST00000582792 XKR3Q5GH77 459 aa15.25■□□□□ 0.03
SS18-222ENST00000582792 NOMO2Q5JPE7 1267 aa15.25■□□□□ 0.03
SS18-222ENST00000582792 TWF2Q6IBS0 349 aaKnown RBP15.25■□□□□ 0.03
SS18-222ENST00000582792 GLB1LQ6UWU2 654 aa15.25■□□□□ 0.03
SS18-222ENST00000582792 ZNF410Q86VK4 478 aa15.25■□□□□ 0.03
SS18-222ENST00000582792 PPFIBP1Q86W92 1011 aa15.25■□□□□ 0.03
SS18-222ENST00000582792 RNF26Q9BY78 433 aaPredicted RBP15.25■□□□□ 0.03
SS18-222ENST00000582792 INO80BQ9C086 356 aaPredicted RBP15.25■□□□□ 0.03
SS18-222ENST00000582792 CYP26B1Q9NR63 512 aa15.25■□□□□ 0.03
SS18-222ENST00000582792 FAM105AQ9NUU6 356 aa15.25■□□□□ 0.03
SS18-222ENST00000582792 TBC1D13Q9NVG8 400 aa15.25■□□□□ 0.03
SS18-222ENST00000582792 PIN4Q9Y237 131 aaKnown RBP15.25■□□□□ 0.03
SS18-222ENST00000582792 RIF1Q5UIP0 2472 aaKnown RBP15.25■□□□□ 0.03
SS18-222ENST00000582792 PTPRZ1P23471 2315 aaPredicted RBP15.25■□□□□ 0.03
SS18-222ENST00000582792 TMEM150BA6NC51 233 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 PRR23AA6NEV1 266 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 MEIS3P2A8K0S8 358 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 ZNF623O75123 536 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 OFD1O75665 1012 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 RAB27AP51159 221 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 LONRF3Q496Y0 759 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 Q4G0T1 1027 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 B3GNT9Q6UX72 402 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 TMC5Q6UXY8 1006 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 MIER3Q7Z3K6 550 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 CABP7Q86V35 215 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 FBXL16Q8N461 479 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 GJA10Q969M2 543 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 VN1R3Q9BXE9 311 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 MFSD1Q9H3U5 465 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 VPS54Q9P1Q0 977 aa15.24■□□□□ 0.03
SS18-222ENST00000582792 SUCLA2Q9P2R7 463 aaPredicted RBP15.24■□□□□ 0.03
SS18-222ENST00000582792 FRYLO94915 3013 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 MAFO75444 373 aaPredicted RBP15.23■□□□□ 0.03
SS18-222ENST00000582792 IFNAR1P17181 557 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 SLC11A1P49279 550 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 RNASELQ05823 741 aaKnown RBP15.23■□□□□ 0.03
SS18-222ENST00000582792 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 BLOC1S2Q6QNY1 142 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 GPR149Q86SP6 731 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 RHPN2Q8IUC4 686 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 FEZF2Q8TBJ5 459 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 TBCKQ8TEA7 893 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 KCNB2Q92953 911 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 ACSF2Q96CM8 615 aaPredicted RBP15.23■□□□□ 0.03
SS18-222ENST00000582792 JAKMIP1Q96N16 626 aaKnown RBP15.23■□□□□ 0.03
SS18-222ENST00000582792 SH2D3AQ9BRG2 576 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 AGXT2Q9BYV1 514 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 SFXN1Q9H9B4 322 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 SH3GLB2Q9NR46 395 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 DNAJB4Q9UDY4 337 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 STK39Q9UEW8 545 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 INPP5FQ9Y2H2 1132 aa15.23■□□□□ 0.03
SS18-222ENST00000582792 DCHS1Q96JQ0 3298 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 ZNF292O60281 2723 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 B4GALT3O60512 393 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 CLCN4P51793 760 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 FOXK2Q01167 660 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 CWF19L1Q69YN2 538 aaKnown RBP15.22■□□□□ 0.03
SS18-222ENST00000582792 CCDC149Q6ZUS6 474 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 OTOP3Q7RTS5 596 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 CATSPER4Q7RTX7 472 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 PGBD4Q96DM1 585 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 EMILIN2Q9BXX0 1053 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 C22orf23Q9BZE7 217 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 GBP3Q9H0R5 595 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 FAM186AA6NE01 2351 aa15.22■□□□□ 0.03
SS18-222ENST00000582792 CYP3A7-CYP3A51PA0A087WV96 503 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 DDX11L8A8MPP1 907 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 TDP2O95551 362 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 CYP3A7P24462 503 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 NLRP5P59047 1200 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 FRMD5Q7Z6J6 570 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 ZNF280BQ86YH2 543 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 KSR1Q8IVT5 923 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 FLCNQ8NFG4 579 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 URGCPQ8TCY9 931 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 NLRP4Q96MN2 994 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 KLHL5Q96PQ7 755 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 JPH2Q9BR39 696 aaPredicted RBP15.21■□□□□ 0.03
SS18-222ENST00000582792 AGPAT5Q9NUQ2 364 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 PCDHB2Q9Y5E7 798 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 SNX14Q9Y5W7 946 aa15.21■□□□□ 0.03
SS18-222ENST00000582792 C2orf16Q68DN1 1984 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 SPDYE4A6NLX3 237 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 LILRB3O75022 631 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 DDHD2O94830 711 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 CNPP09543 421 aaKnown RBP15.2■□□□□ 0.02
SS18-222ENST00000582792 AOC1P19801 751 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 RPS6KB1P23443 525 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 KLRC2P26717 231 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 HSPA4P34932 840 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 PSMC5P62195 406 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 TDGQ13569 410 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 MOXD1Q6UVY6 613 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 AGMOQ6ZNB7 445 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 C15orf39Q6ZRI6 1047 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms