RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 BICD1Q96G01 975 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 PPP1R13BQ96KQ4 1090 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 FGFBP2Q9BYJ0 223 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 EDEM3Q9BZQ6 932 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 DEF6Q9H4E7 631 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 FAM207AQ9NSI2 230 aaPredicted RBP10.16□□□□□ -0.78
SS18-220ENST00000582092 CEP290O15078 2479 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 TNRC18O15417 2968 aaPredicted RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 SLC16A4O15374 487 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 IGHA2P01877 340 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 TXNP10599 105 aaKnown RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 SCP2P22307 547 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 RFC5P40937 340 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 STAT5BP51692 787 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 TERF1P54274 439 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 MARSP56192 900 aaKnown RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 KCNH2Q12809 1159 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 MYBPC2Q14324 1141 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 NFIL3Q16649 462 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 MIIPQ5JXC2 388 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 PRAMEF19Q5SWL8 479 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 E4F1Q66K89 784 aaPredicted RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 GBP6Q6ZN66 633 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 RRAGAQ7L523 313 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 USP37Q86T82 979 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 KIAA1328Q86T90 577 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 DIS3LQ8TF46 1054 aaKnown RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 SCFD2Q8WU76 684 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 SLC7A3Q8WY07 619 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 CCDC42Q96M95 316 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 JPH2Q9BR39 696 aaPredicted RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 SH2D3AQ9BRG2 576 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 MKNK1Q9BUB5 465 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 LSM14BQ9BX40 385 aaKnown RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 SENP6Q9GZR1 1112 aaPredicted RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 LUC7LQ9NQ29 371 aaKnown RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 XPNPEP3Q9NQH7 507 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 CYP26B1Q9NR63 512 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 PRKAG2Q9UGJ0 569 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 ZHX1Q9UKY1 873 aaPredicted RBP10.15□□□□□ -0.78
SS18-220ENST00000582092 PPME1Q9Y570 386 aa10.15□□□□□ -0.78
SS18-220ENST00000582092 SOWAHDA6NJG2 315 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 H0YGN5 161 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 KIF5CO60282 957 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 N4BP1O75113 896 aaKnown RBP10.14□□□□□ -0.79
SS18-220ENST00000582092 RGS20O76081 388 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 ATG7O95352 703 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 OATP04181 439 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 UBA1P22314 1058 aaKnown RBP10.14□□□□□ -0.79
SS18-220ENST00000582092 EDNRBP24530 442 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 CASQ1P31415 396 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 MATR3P43243 847 aaKnown RBP eCLIP10.14□□□□□ -0.79
SS18-220ENST00000582092 ACVR2BQ13705 512 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 EXOC3L4Q17RC7 722 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 LY6KQ17RY6 165 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 SFMBT2Q5VUG0 894 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 METTL7BQ6UX53 244 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 ANO5Q75V66 913 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 ARMCX2Q7L311 632 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 FMNL3Q8IVF7 1028 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 KSR1Q8IVT5 923 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 CCDC60Q8IWA6 550 aaPredicted RBP10.14□□□□□ -0.79
SS18-220ENST00000582092 TRIM59Q8IWR1 403 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 ZC3H3Q8IXZ2 948 aaKnown RBP10.14□□□□□ -0.79
SS18-220ENST00000582092 CCDC170Q8IYT3 715 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 PCSK9Q8NBP7 692 aaKnown RBP10.14□□□□□ -0.79
SS18-220ENST00000582092 TRPV1Q8NER1 839 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 DEPTORQ8TB45 409 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 TCP11Q8WWU5 503 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 SPATA33Q96N06 139 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 SPAG5Q96R06 1193 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 DNAJC7Q99615 494 aa10.14□□□□□ -0.79
SS18-220ENST00000582092 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.14□□□□□ -0.79
SS18-220ENST00000582092 EPN1Q9Y6I3 576 aaPredicted RBP10.14□□□□□ -0.79
SS18-220ENST00000582092 ASTN1O14525 1302 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 DENND3A2RUS2 1198 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 TMEM150BA6NC51 233 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 USP27XA6NNY8 438 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 AKR1B10O60218 316 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 DUSP11O75319 330 aaKnown RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 SNAI1O95863 264 aaPredicted RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 ZNF865P0CJ78 1059 aaPredicted RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 COL6A1P12109 1028 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 TCF7P36402 384 aaPredicted RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 RTP1P59025 263 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 GNG11P61952 73 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 GTF2BQ00403 316 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 SP2Q02086 613 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 MAPK7Q13164 816 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 LAMC2Q13753 1193 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 EMC2Q15006 297 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 CELF3Q5SZQ8 465 aaKnown RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 GJC2Q5T442 439 aaPredicted RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 INTS8Q75QN2 995 aaKnown RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 C7orf61Q8IZ16 206 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 XXYLT1Q8NBI6 393 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 SPIRE2Q8WWL2 714 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 TSEN34Q9BSV6 310 aaKnown RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 POLR3FQ9H1D9 316 aaPredicted RBP10.13□□□□□ -0.79
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