RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 LAMTOR4Q0VGL1 99 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 MXD4Q14582 209 aaPredicted RBP24.93■■□□□ 1.58
CASC3-207ENST00000581849 C8orf34Q49A92 452 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 FERMT3Q86UX7 667 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 CCDC83Q8IWF9 413 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 ADHFE1Q8IWW8 467 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 HELQQ8TDG4 1101 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 TMEM143Q96AN5 459 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 C8orf76Q96K31 380 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 FOXP1Q9H334 677 aaPredicted RBP24.93■■□□□ 1.58
CASC3-207ENST00000581849 NGRNQ9NPE2 291 aaKnown RBP24.93■■□□□ 1.58
CASC3-207ENST00000581849 SPG21Q9NZD8 308 aa24.93■■□□□ 1.58
CASC3-207ENST00000581849 C19orf67A6NJJ6 358 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 PI4K2BG5E9Z4 385 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 DGAT1O75907 488 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 XRCC6P12956 609 aaKnown RBP eCLIP24.92■■□□□ 1.58
CASC3-207ENST00000581849 SSTR3P32745 418 aaPredicted RBP24.92■■□□□ 1.58
CASC3-207ENST00000581849 TXKP42681 527 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 ERVFC1P60507 584 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 POU5F1BQ06416 359 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 COASYQ13057 564 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 SLC39A11Q8N1S5 342 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 PGBD4Q96DM1 585 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 POP1Q99575 1024 aaKnown RBP24.92■■□□□ 1.58
CASC3-207ENST00000581849 KIF2CQ99661 725 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 EPHX3Q9H6B9 360 aa24.92■■□□□ 1.58
CASC3-207ENST00000581849 WNT7AO00755 349 aa24.91■■□□□ 1.58
CASC3-207ENST00000581849 FOSBP53539 338 aa24.91■■□□□ 1.58
CASC3-207ENST00000581849 DUSP6Q16828 381 aa24.91■■□□□ 1.58
CASC3-207ENST00000581849 GLB1LQ6UWU2 654 aa24.91■■□□□ 1.58
CASC3-207ENST00000581849 IFNLR1Q8IU57 520 aaPredicted RBP24.91■■□□□ 1.58
CASC3-207ENST00000581849 XPNPEP1Q9NQW7 623 aa24.91■■□□□ 1.58
CASC3-207ENST00000581849 CLEC1BQ9P126 229 aa24.91■■□□□ 1.58
CASC3-207ENST00000581849 SRGAP2CP0DJJ0 459 aa24.9■■□□□ 1.58
CASC3-207ENST00000581849 RBM25P49756 843 aaKnown RBP24.9■■□□□ 1.58
CASC3-207ENST00000581849 RNF149Q8NC42 400 aa24.9■■□□□ 1.58
CASC3-207ENST00000581849 SMRP1Q8NCR6 262 aa24.9■■□□□ 1.58
CASC3-207ENST00000581849 FBXO18Q8NFZ0 1043 aa24.9■■□□□ 1.58
CASC3-207ENST00000581849 PCDHGC5Q9Y5F6 944 aa24.9■■□□□ 1.58
CASC3-207ENST00000581849 ZBTB39O15060 712 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 GLP2RO95838 553 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 SRGAP2BP0DMP2 458 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 ALDH7A1P49419 539 aaKnown RBP24.89■■□□□ 1.58
CASC3-207ENST00000581849 RARRES1P49788 294 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 TFDP1Q14186 410 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 TMEM184AQ6ZMB5 413 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 MRPL10Q7Z7H8 261 aaKnown RBP24.89■■□□□ 1.58
CASC3-207ENST00000581849 RBM23Q86U06 439 aaKnown RBP24.89■■□□□ 1.58
CASC3-207ENST00000581849 CNNM3Q8NE01 707 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 KHSRPQ92945 711 aaKnown RBP eCLIP24.89■■□□□ 1.581e-8■□□□□ 8.7
CASC3-207ENST00000581849 CCDC51Q96ER9 411 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 CCDC43Q96MW1 224 aaKnown RBP24.89■■□□□ 1.58
CASC3-207ENST00000581849 TCF25Q9BQ70 676 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 TMEM60Q9H2L4 133 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 MINDY3Q9H8M7 445 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 TUFT1Q9NNX1 390 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 PCDHB2Q9Y5E7 798 aa24.89■■□□□ 1.58
CASC3-207ENST00000581849 CNTNAP2Q9UHC6 1331 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 GPR37L1O60883 481 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 ALADP13716 330 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 COL9A1P20849 921 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 AXLP30530 894 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 HOXA11P31270 313 aaPredicted RBP24.88■■□□□ 1.57
CASC3-207ENST00000581849 TRAPPC10P48553 1259 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 PTENP60484 403 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 GUCY1B3Q02153 619 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 CLUL1Q15846 466 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 NOMO2Q5JPE7 1267 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 NFKBIZQ9BYH8 718 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 ENTPD7Q9NQZ7 604 aa24.88■■□□□ 1.57
CASC3-207ENST00000581849 BMP2KQ9NSY1 1161 aaPredicted RBP24.88■■□□□ 1.57
CASC3-207ENST00000581849 OFD1O75665 1012 aa24.87■■□□□ 1.57
CASC3-207ENST00000581849 MCM7P33993 719 aa24.87■■□□□ 1.57
CASC3-207ENST00000581849 BCAR1P56945 870 aa24.87■■□□□ 1.57
CASC3-207ENST00000581849 KCNC3Q14003 757 aa24.87■■□□□ 1.57
CASC3-207ENST00000581849 BMS1Q14692 1282 aaKnown RBP24.87■■□□□ 1.57
CASC3-207ENST00000581849 TMEM31Q5JXX7 168 aa24.87■■□□□ 1.57
CASC3-207ENST00000581849 FAM184AQ8NB25 1140 aa24.87■■□□□ 1.57
CASC3-207ENST00000581849 TMEM169Q96HH4 297 aa24.87■■□□□ 1.57
CASC3-207ENST00000581849 TBC1D13Q9NVG8 400 aa24.87■■□□□ 1.57
CASC3-207ENST00000581849 POTEMA6NI47 508 aa24.86■■□□□ 1.57
CASC3-207ENST00000581849 ERLIN2O94905 339 aa24.86■■□□□ 1.57
CASC3-207ENST00000581849 OR52Z1P0C646 297 aa24.86■■□□□ 1.57
CASC3-207ENST00000581849 ARL2P36404 184 aa24.86■■□□□ 1.57
CASC3-207ENST00000581849 PBX3P40426 434 aa24.86■■□□□ 1.57
CASC3-207ENST00000581849 SMC1AQ14683 1233 aaKnown RBP24.86■■□□□ 1.57
CASC3-207ENST00000581849 PLPP4Q5VZY2 271 aa24.86■■□□□ 1.57
CASC3-207ENST00000581849 LPPQ93052 612 aa24.86■■□□□ 1.57
CASC3-207ENST00000581849 POLR3CQ9BUI4 534 aaPredicted RBP24.86■■□□□ 1.57
CASC3-207ENST00000581849 STK39Q9UEW8 545 aa24.86■■□□□ 1.57
CASC3-207ENST00000581849 BARX2Q9UMQ3 279 aaPredicted RBP24.86■■□□□ 1.57
CASC3-207ENST00000581849 PER2O15055 1255 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 SPATA31C1P0DKV0 1188 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 NCLP19338 710 aaKnown RBP24.85■■□□□ 1.57
CASC3-207ENST00000581849 MUTP22033 750 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 NCBP1Q09161 790 aaKnown RBP24.85■■□□□ 1.57
CASC3-207ENST00000581849 RABEP1Q15276 862 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 UBXN11Q5T124 520 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 TMC7Q7Z402 723 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 NOSTRINQ8IVI9 506 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms