RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 SLC25A43Q8WUT9 341 aaPredicted RBP4.93□□□□□ -1.62
SMG8-205ENST00000580798 NBPF4Q96M43 638 aa4.93□□□□□ -1.62
SMG8-205ENST00000580798 SIRPGQ9P1W8 387 aa4.93□□□□□ -1.62
SMG8-205ENST00000580798 COQ6Q9Y2Z9 468 aa4.93□□□□□ -1.62
SMG8-205ENST00000580798 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.92□□□□□ -1.62
SMG8-205ENST00000580798 CCDC189A1A4V9 331 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 TCERG1O14776 1098 aaKnown RBP4.92□□□□□ -1.62
SMG8-205ENST00000580798 FOXP2O15409 715 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 DHX16O60231 1041 aaKnown RBP4.92□□□□□ -1.62
SMG8-205ENST00000580798 ZNF37AP17032 561 aaPredicted RBP4.92□□□□□ -1.62
SMG8-205ENST00000580798 MAN1A1P33908 653 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 GYS2P54840 703 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 ZRSR2Q15696 482 aaKnown RBP4.92□□□□□ -1.62
SMG8-205ENST00000580798 LONRF2Q1L5Z9 754 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 CCDC144BQ3MJ40 725 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 GRAMD4Q6IC98 578 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 SYCE2Q6PIF2 218 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 GAREM2Q75VX8 874 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 PCGF5Q86SE9 256 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 CREBRFQ8IUR6 639 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 PAF1Q8N7H5 531 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 PRPF38AQ8NAV1 312 aaKnown RBP4.92□□□□□ -1.62
SMG8-205ENST00000580798 HIPK4Q8NE63 616 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 GSTCDQ8NEC7 633 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 LENG9Q96B70 501 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 GBP4Q96PP9 640 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 PAGR1Q9BTK6 254 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 MLST8Q9BVC4 326 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 SPC25Q9HBM1 224 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 KCNH7Q9NS40 1196 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 GEMIN8Q9NWZ8 242 aaKnown RBP4.92□□□□□ -1.62
SMG8-205ENST00000580798 COL4A3BPQ9Y5P4 624 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 XDHP47989 1333 aa4.92□□□□□ -1.62
SMG8-205ENST00000580798 PRAMEF22A3QJZ6 481 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 ZAR1LA6NP61 321 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 PLIN1O60240 522 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 GTF2F1P35269 517 aaKnown RBP eCLIP4.91□□□□□ -1.62
SMG8-205ENST00000580798 TBX4P57082 545 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 ADAM15Q13444 863 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 SERINC3Q13530 473 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 RASA3Q14644 834 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 ACAP1Q15027 740 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 ICE2Q659A1 982 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 CCDC174Q6PII3 467 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 GET4Q7L5D6 327 aaPredicted RBP4.91□□□□□ -1.62
SMG8-205ENST00000580798 OVCH1Q7RTY7 1134 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 OTUD6BQ8N6M0 293 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 ARMC5Q96C12 935 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 DEPDC7Q96QD5 511 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 CELF4Q9BZC1 486 aaKnown RBP4.91□□□□□ -1.62
SMG8-205ENST00000580798 G3BP2Q9UN86 482 aaKnown RBP4.91□□□□□ -1.62
SMG8-205ENST00000580798 HDAC5Q9UQL6 1122 aa4.91□□□□□ -1.62
SMG8-205ENST00000580798 CTDP1Q9Y5B0 961 aaPredicted RBP4.91□□□□□ -1.62
SMG8-205ENST00000580798 GRID2IPA4D2P6 1211 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 FAM221BA6H8Z2 402 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 INO80B-WBP1J3KQ70 363 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 HSP90AB1P08238 724 aaKnown RBP4.9□□□□□ -1.63
SMG8-205ENST00000580798 VDRP11473 427 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 ATP2C1P98194 919 aaPredicted RBP4.9□□□□□ -1.63
SMG8-205ENST00000580798 PLEKHG6Q3KR16 790 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 RABL3Q5HYI8 236 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 CATSPEREQ5SY80 951 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 SOGA3Q5TF21 947 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 ADGRG3Q86Y34 549 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 GSPT2Q8IYD1 628 aaKnown RBP4.9□□□□□ -1.63
SMG8-205ENST00000580798 BCL6BQ8N143 479 aaPredicted RBP4.9□□□□□ -1.63
SMG8-205ENST00000580798 ZNF276Q8N554 614 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 SLC7A14Q8TBB6 771 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 DLG3Q92796 817 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 MKL1Q969V6 931 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 GPR87Q9BY21 358 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 INO80BQ9C086 356 aaPredicted RBP4.9□□□□□ -1.63
SMG8-205ENST00000580798 ZSWIM4Q9H7M6 989 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 SNTG2Q9NY99 539 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 TRPS1Q9UHF7 1281 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 SFMBT1Q9UHJ3 866 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 TBX22Q9Y458 520 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 ASB1Q9Y576 335 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 B3GALT1Q9Y5Z6 326 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 SCINQ9Y6U3 715 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 RPGRIP1LQ68CZ1 1315 aa4.9□□□□□ -1.63
SMG8-205ENST00000580798 SLC12A8A0AV02 714 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 BICDL2A1A5D9 508 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 GOLGA6CA6NDK9 693 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 GOLGA6BA6NDN3 693 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 EFCAB14O75071 495 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 GOLGA6DP0CG33 693 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 CD53P19397 219 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 HSD3B2P26439 372 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 SDHAP31040 664 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 ANP32AP39687 249 aaKnown RBP4.89□□□□□ -1.63
SMG8-205ENST00000580798 SSR1P43307 286 aaKnown RBP4.89□□□□□ -1.63
SMG8-205ENST00000580798 ADCY7P51828 1080 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 POU5F1BQ06416 359 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 TMEM132BQ14DG7 1078 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 ELAVL1Q15717 326 aaKnown RBP4.89□□□□□ -1.63
SMG8-205ENST00000580798 TRIM61Q5EBN2 209 aa4.89□□□□□ -1.63
SMG8-205ENST00000580798 ZC3H12BQ5HYM0 836 aaKnown RBP4.89□□□□□ -1.63
SMG8-205ENST00000580798 CC2D1BQ5T0F9 858 aaKnown RBP4.89□□□□□ -1.63
SMG8-205ENST00000580798 ABHD17CQ6PCB6 329 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms