RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 LAG3P18627 525 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 SYT1P21579 422 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 GLRA2P23416 452 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 PPP2R5AQ15172 486 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 PCBP1Q15365 356 aaKnown RBP eCLIP12.08□□□□□ -0.48
NDEL1-208ENST00000580237 LONRF3Q496Y0 759 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 ARL6IP4Q66PJ3 421 aaKnown RBP12.08□□□□□ -0.48
NDEL1-208ENST00000580237 GLB1LQ6UWU2 654 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 THNSL1Q8IYQ7 743 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 CRIPAKQ8N1N5 446 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 DEPTORQ8TB45 409 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 HELQQ8TDG4 1101 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 PGBD4Q96DM1 585 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 TRIM6Q9C030 488 aaPredicted RBP12.08□□□□□ -0.48
NDEL1-208ENST00000580237 LMAN2LQ9H0V9 348 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 MINDY3Q9H8M7 445 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 DNM3Q9UQ16 869 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 INPP5FQ9Y2H2 1132 aa12.08□□□□□ -0.48
NDEL1-208ENST00000580237 TSPAN1O60635 241 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 EOMESO95936 686 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 LIG1P18858 919 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 CYP11B2P19099 503 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 CDC25AP30304 524 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 ARL2P36404 184 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 PTENP60484 403 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 FAM189BP81408 668 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 RNASELQ05823 741 aaKnown RBP12.07□□□□□ -0.48
NDEL1-208ENST00000580237 SF3A1Q15459 793 aaKnown RBP12.07□□□□□ -0.48
NDEL1-208ENST00000580237 CSPP1Q1MSJ5 1256 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 AAK1Q2M2I8 961 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 CLLU1OSQ5K130 101 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 NOTUMQ6P988 496 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 EP400NLQ6ZTU2 488 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 HACE1Q8IYU2 909 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 URGCPQ8TCY9 931 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 LPPQ93052 612 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 P2RX5Q93086 422 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 PPP2R3CQ969Q6 453 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 SNX21Q969T3 373 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 IFT74Q96LB3 600 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 NT5C3AQ9H0P0 336 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 C2orf40Q9H1Z8 148 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 NSUN3Q9H649 340 aaKnown RBP12.07□□□□□ -0.48
NDEL1-208ENST00000580237 ALG13Q9NP73 1137 aaKnown RBP12.07□□□□□ -0.48
NDEL1-208ENST00000580237 HCSTQ9UBK5 93 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 TRANK1O15050 2925 aa12.07□□□□□ -0.48
NDEL1-208ENST00000580237 E9PMD0 336 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 GRM6O15303 877 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 STX6O43752 255 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 EYA4O95677 639 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 LINC00271P0C7V0 271 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 ATF7P17544 494 aaPredicted RBP12.06□□□□□ -0.48
NDEL1-208ENST00000580237 AXLP30530 894 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 PPM1AP35813 382 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 UBA7P41226 1012 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 NAMPTP43490 491 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 MBTD1Q05BQ5 628 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 IL17AQ16552 155 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 ECM1Q16610 540 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 NAALADL2Q58DX5 795 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 CABP7Q86V35 215 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 KLHL23Q8NBE8 558 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 COLGALT1Q8NBJ5 622 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 ATXN2LQ8WWM7 1075 aaKnown RBP12.06□□□□□ -0.48
NDEL1-208ENST00000580237 RSPH1Q8WYR4 309 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 KIFAP3Q92845 792 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 CCDC51Q96ER9 411 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 CALML4Q96GE6 196 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 CPB2Q96IY4 423 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 AK8Q96MA6 479 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 ZNF558Q96NG5 402 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 PLIN2Q99541 437 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 NFKBIZQ9BYH8 718 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 TYW1Q9NV66 732 aaKnown RBP12.06□□□□□ -0.48
NDEL1-208ENST00000580237 PCDHB2Q9Y5E7 798 aa12.06□□□□□ -0.48
NDEL1-208ENST00000580237 CITO14578 2027 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 ZC3H11AO75152 810 aaKnown RBP eCLIP12.05□□□□□ -0.48
NDEL1-208ENST00000580237 ITGB1P05556 798 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 MRPS5P82675 430 aaKnown RBP12.05□□□□□ -0.48
NDEL1-208ENST00000580237 CEBPZQ03701 1054 aaKnown RBP12.05□□□□□ -0.48
NDEL1-208ENST00000580237 POU5F1BQ06416 359 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 RESTQ13127 1097 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 DMP1Q13316 513 aaPredicted RBP12.05□□□□□ -0.48
NDEL1-208ENST00000580237 MAPK6Q16659 721 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 TCEAL5Q5H9L2 206 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 TJAP1Q5JTD0 557 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 ZNF598Q86UK7 904 aaKnown RBP12.05□□□□□ -0.48
NDEL1-208ENST00000580237 IFNLR1Q8IU57 520 aaPredicted RBP12.05□□□□□ -0.48
NDEL1-208ENST00000580237 CNNM3Q8NE01 707 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 HLA-CQ95604 372 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 DRC1Q96MC2 740 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 CASD1Q96PB1 797 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 APOL6Q9BWW8 343 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 GBP3Q9H0R5 595 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 RSAD1Q9HA92 442 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 RNF19AQ9NV58 838 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 PRMT7Q9NVM4 692 aaPredicted RBP12.05□□□□□ -0.48
NDEL1-208ENST00000580237 COG5Q9UP83 839 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 PLAGL2Q9UPG8 496 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms