RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 CCDC85BQ15834 202 aaPredicted RBP26.53■■□□□ 1.84
LIMD2-207ENST00000579329 CLP1Q92989 425 aaKnown RBP26.53■■□□□ 1.84
LIMD2-207ENST00000579329 TRAIPQ9BWF2 469 aa26.53■■□□□ 1.84
LIMD2-207ENST00000579329 INO80B-WBP1J3KQ70 363 aa26.52■■□□□ 1.84
LIMD2-207ENST00000579329 ERLIN2O94905 339 aa26.52■■□□□ 1.84
LIMD2-207ENST00000579329 CTNNB1P35222 781 aa26.52■■□□□ 1.84
LIMD2-207ENST00000579329 PTPAQ15257 358 aa26.52■■□□□ 1.84
LIMD2-207ENST00000579329 CABP7Q86V35 215 aa26.52■■□□□ 1.84
LIMD2-207ENST00000579329 NLRC5Q86WI3 1866 aa26.52■■□□□ 1.84
LIMD2-207ENST00000579329 PNMA5Q96PV4 448 aa26.52■■□□□ 1.84
LIMD2-207ENST00000579329 MRPL42Q9Y6G3 142 aaKnown RBP26.52■■□□□ 1.84
LIMD2-207ENST00000579329 LRRIQ4A6NIV6 560 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 TBKBP1A7MCY6 615 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 LPXNO60711 386 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 EOMESO95936 686 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 LINC00271P0C7V0 271 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 FGFR1P11362 822 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 SKIP12755 728 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 UBA7P41226 1012 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 RAB27AP51159 221 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 KCNK18Q7Z418 384 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 ASB2Q96Q27 587 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 MTCH2Q9Y6C9 303 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 REV3LO60673 3130 aa26.51■■□□□ 1.83
LIMD2-207ENST00000579329 RB1P06400 928 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 AXLP30530 894 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 BMPR1AP36894 532 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 MBTD1Q05BQ5 628 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 PPP2R5AQ15172 486 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 TMEM119Q4V9L6 283 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 ZNF598Q86UK7 904 aaKnown RBP26.5■■□□□ 1.83
LIMD2-207ENST00000579329 SPRYD3Q8NCJ5 442 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 RNF169Q8NCN4 708 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 ADAMTS19Q8TE59 1207 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 KIFAP3Q92845 792 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 CALML4Q96GE6 196 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 TMEM117Q9H0C3 514 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 LMCD1Q9NZU5 365 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 RAPGEFL1Q9UHV5 662 aa26.5■■□□□ 1.83
LIMD2-207ENST00000579329 C5orf67F2Z3F1 127 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 TSPAN1O60635 241 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 CEBPZQ03701 1054 aaKnown RBP26.49■■□□□ 1.83
LIMD2-207ENST00000579329 GRIN1Q05586 938 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 NCBP1Q09161 790 aaKnown RBP26.49■■□□□ 1.83
LIMD2-207ENST00000579329 ZBTB8OSQ8IWT0 167 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 ABI1Q8IZP0 508 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 BSNDQ8WZ55 320 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 USP28Q96RU2 1077 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 PLIN2Q99541 437 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 FAM105AQ9NUU6 356 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 RNF19AQ9NV58 838 aa26.49■■□□□ 1.83
LIMD2-207ENST00000579329 FNDC1Q4ZHG4 1894 aaPredicted RBP26.49■■□□□ 1.83
LIMD2-207ENST00000579329 H3BNC9 293 aa26.48■■□□□ 1.83
LIMD2-207ENST00000579329 ATF7P17544 494 aaPredicted RBP26.48■■□□□ 1.83
LIMD2-207ENST00000579329 MARCKSP29966 332 aaPredicted RBP26.48■■□□□ 1.83
LIMD2-207ENST00000579329 HOXA11P31270 313 aaPredicted RBP26.48■■□□□ 1.83
LIMD2-207ENST00000579329 NAMPTP43490 491 aa26.48■■□□□ 1.83
LIMD2-207ENST00000579329 GPM6BQ13491 265 aa26.48■■□□□ 1.83
LIMD2-207ENST00000579329 CDCA2Q69YH5 1023 aaPredicted RBP26.48■■□□□ 1.83
LIMD2-207ENST00000579329 MICALL1Q8N3F8 863 aa26.48■■□□□ 1.83
LIMD2-207ENST00000579329 IFT74Q96LB3 600 aa26.48■■□□□ 1.83
LIMD2-207ENST00000579329 C11orf84Q9BUA3 381 aaPredicted RBP26.48■■□□□ 1.83
LIMD2-207ENST00000579329 PLVAPQ9BX97 442 aa26.48■■□□□ 1.83
LIMD2-207ENST00000579329 C2orf40Q9H1Z8 148 aa26.48■■□□□ 1.83
LIMD2-207ENST00000579329 MORC2Q9Y6X9 1032 aaPredicted RBP26.48■■□□□ 1.83
LIMD2-207ENST00000579329 ZNF623O75123 536 aa26.47■■□□□ 1.83
LIMD2-207ENST00000579329 ZSCAN22P10073 491 aaPredicted RBP26.47■■□□□ 1.83
LIMD2-207ENST00000579329 MRPS5P82675 430 aaKnown RBP26.47■■□□□ 1.83
LIMD2-207ENST00000579329 RINT1Q6NUQ1 792 aa26.47■■□□□ 1.83
LIMD2-207ENST00000579329 CCDC51Q96ER9 411 aa26.47■■□□□ 1.83
LIMD2-207ENST00000579329 ZNF396Q96N95 335 aaPredicted RBP26.47■■□□□ 1.83
LIMD2-207ENST00000579329 RUSC1Q9BVN2 902 aa26.47■■□□□ 1.83
LIMD2-207ENST00000579329 FBXO2Q9UK22 296 aaPredicted RBP26.47■■□□□ 1.83
LIMD2-207ENST00000579329 SRPRBQ9Y5M8 271 aaKnown RBP26.47■■□□□ 1.83
LIMD2-207ENST00000579329 SSBP05455 408 aaKnown RBP eCLIP26.46■■□□□ 1.83
LIMD2-207ENST00000579329 SLC39A14Q15043 492 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 AMHR2Q16671 573 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 CLLU1OSQ5K130 101 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 SPOUT1Q5T280 376 aaKnown RBP26.46■■□□□ 1.83
LIMD2-207ENST00000579329 NOTUMQ6P988 496 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 C1orf186Q6ZWK4 172 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 SYT2Q8N9I0 419 aaPredicted RBP26.46■■□□□ 1.83
LIMD2-207ENST00000579329 RASSF8Q8NHQ8 419 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 DEPTORQ8TB45 409 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 RSPH1Q8WYR4 309 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 CASD1Q96PB1 797 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 TIPINQ9BVW5 301 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 CSRNP2Q9H175 543 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 PRMT7Q9NVM4 692 aaPredicted RBP26.46■■□□□ 1.83
LIMD2-207ENST00000579329 PCDHB2Q9Y5E7 798 aa26.46■■□□□ 1.83
LIMD2-207ENST00000579329 MYH15Q9Y2K3 1946 aa26.45■■□□□ 1.83
LIMD2-207ENST00000579329 KIAA1671Q9BY89 1806 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 F13A1P00488 732 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 PLA2G4BP0C869 781 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 NASPP49321 788 aaPredicted RBP26.45■■□□□ 1.82
LIMD2-207ENST00000579329 PTPROQ16827 1216 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 UBXN11Q5T124 520 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 FOXD4L5Q5VV16 416 aaPredicted RBP26.45■■□□□ 1.82
LIMD2-207ENST00000579329 PPP4R3CPQ6ZMV5 832 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 LRRC43Q8N309 656 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms