RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 KIZQ2M2Z5 673 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 LRIT3Q3SXY7 679 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 C7orf61Q8IZ16 206 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TMEM199Q8N511 208 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CTAGE1Q96RT6 745 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NOC4LQ9BVI4 516 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PPP1R12CQ9BZL4 782 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TBX21Q9UL17 535 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MICAL3Q7RTP6 2002 aa12.43□□□□□ -0.42
CDK5RAP3-210ENST00000578733 UBE4BO95155 1302 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CITO14578 2027 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 A0A087WZ62 844 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SFI1A8K8P3 1242 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RPS6KA5O75582 802 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ERLIN2O94905 339 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TIMP1P01033 207 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 EIF4BP23588 611 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PPP1R2P41236 205 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NPTX2P47972 431 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NCKAP1LP55160 1127 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PTENP60484 403 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MDM2Q00987 491 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MAPK6Q16659 721 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TMEM132AQ24JP5 1023 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TRIM71Q2Q1W2 868 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 FAM26FQ5R3K3 315 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ZNF618Q5T7W0 954 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SFR1Q86XK3 245 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RPUSD2Q8IZ73 545 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DAW1Q8N136 415 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TRIML1Q8N9V2 468 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DHX38Q92620 1227 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 HVCN1Q96D96 273 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PRIMPOLQ96LW4 560 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 OSMRQ99650 979 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 FDXACB1Q9BRP7 624 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NTPCRQ9BSD7 190 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TMEM134Q9H6X4 195 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PRMT7Q9NVM4 692 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 EXOC7Q9UPT5 735 aa12.42□□□□□ -0.42
CDK5RAP3-210ENST00000578733 INO80B-WBP1J3KQ70 363 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 K7ERI5 159 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GPR182O15218 404 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SLC16A4O15374 487 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GPR32O75388 356 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 RHOBTB3O94955 611 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 GCNT3O95395 438 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DARSP14868 501 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CASP1P29466 404 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MGAT3Q09327 533 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PAK2Q13177 524 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 STIM1Q13586 685 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KMT5BQ4FZB7 885 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CDCA2Q69YH5 1023 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CAVIN1Q6NZI2 390 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TSHZ1Q6ZSZ6 1077 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 HAUS6Q7Z4H7 955 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 APBB1IPQ7Z5R6 666 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KSR1Q8IVT5 923 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TDHQ8IZJ6 230 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SPATA20Q8TB22 786 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 APBB2Q92870 758 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 WNT8BQ93098 351 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PPP1R16BQ96T49 567 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ADAMTS10Q9H324 1103 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ST6GALNAC4Q9H4F1 302 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 POLD4Q9HCU8 107 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KIAA1468Q9P260 1216 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PCDHA5Q9Y5H7 936 aa12.41□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DENND3A2RUS2 1198 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 EIF3DO15371 548 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KLRC4O43908 158 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CHRNA1P02708 482 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PFKMP08237 780 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 IQCF3P0C7M6 154 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 AXLP30530 894 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 PPIGQ13427 754 aaKnown RBP eCLIP12.4□□□□□ -0.424e-14■■■■□ 20.9
CDK5RAP3-210ENST00000578733 FBXO47Q5MNV8 452 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 NT5DC1Q5TFE4 455 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MFSD5Q6N075 450 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 SASS6Q6UVJ0 657 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 CATSPER4Q7RTX7 472 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 BSNDQ8WZ55 320 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 KCNN1Q92952 543 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ACCSQ96QU6 501 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 LBHD1Q9BQE6 289 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TMEM206Q9H813 350 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 IFT122Q9HBG6 1241 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 MTMR10Q9NXD2 777 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 DACH1Q9UI36 760 aa12.4□□□□□ -0.42
CDK5RAP3-210ENST00000578733 TET1Q8NFU7 2136 aa12.4□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PRKCBP05771 671 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ZSCAN20P17040 1043 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CYP2C18P33260 490 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CCL23P55773 120 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms