RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PTPAQ15257 358 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 FAM173BQ6P4H8 233 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 ZNF598Q86UK7 904 aaKnown RBP26.03■■□□□ 1.76
SNF8-217ENST00000576353 CABP7Q86V35 215 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 PPM1EQ8WY54 764 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 KIFAP3Q92845 792 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 C11orf84Q9BUA3 381 aaPredicted RBP26.03■■□□□ 1.76
SNF8-217ENST00000576353 PLVAPQ9BX97 442 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 FAM105AQ9NUU6 356 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 ZNF623O75123 536 aa26.02■■□□□ 1.76
SNF8-217ENST00000576353 HOXA11P31270 313 aaPredicted RBP26.02■■□□□ 1.76
SNF8-217ENST00000576353 MBTD1Q05BQ5 628 aa26.02■■□□□ 1.76
SNF8-217ENST00000576353 CCDC85BQ15834 202 aaPredicted RBP26.02■■□□□ 1.76
SNF8-217ENST00000576353 PTPROQ16827 1216 aa26.02■■□□□ 1.76
SNF8-217ENST00000576353 MICALL1Q8N3F8 863 aa26.02■■□□□ 1.76
SNF8-217ENST00000576353 CALML4Q96GE6 196 aa26.02■■□□□ 1.76
SNF8-217ENST00000576353 PNMA5Q96PV4 448 aa26.02■■□□□ 1.76
SNF8-217ENST00000576353 C2orf40Q9H1Z8 148 aa26.02■■□□□ 1.76
SNF8-217ENST00000576353 NAMPTP43490 491 aa26.01■■□□□ 1.75
SNF8-217ENST00000576353 KCNK18Q7Z418 384 aa26.01■■□□□ 1.75
SNF8-217ENST00000576353 ZBTB8OSQ8IWT0 167 aa26.01■■□□□ 1.75
SNF8-217ENST00000576353 RSPH1Q8WYR4 309 aa26.01■■□□□ 1.75
SNF8-217ENST00000576353 CCDC51Q96ER9 411 aa26.01■■□□□ 1.75
SNF8-217ENST00000576353 IFT74Q96LB3 600 aa26.01■■□□□ 1.75
SNF8-217ENST00000576353 AAASQ9NRG9 546 aa26.01■■□□□ 1.75
SNF8-217ENST00000576353 TSPAN1O60635 241 aa26■■□□□ 1.75
SNF8-217ENST00000576353 CEBPZQ03701 1054 aaKnown RBP26■■□□□ 1.75
SNF8-217ENST00000576353 TMEM119Q4V9L6 283 aa26■■□□□ 1.75
SNF8-217ENST00000576353 NAALADL2Q58DX5 795 aa26■■□□□ 1.75
SNF8-217ENST00000576353 SPOUT1Q5T280 376 aaKnown RBP26■■□□□ 1.75
SNF8-217ENST00000576353 SLC17A8Q8NDX2 589 aa26■■□□□ 1.75
SNF8-217ENST00000576353 DEPTORQ8TB45 409 aa26■■□□□ 1.75
SNF8-217ENST00000576353 PGBD4Q96DM1 585 aa26■■□□□ 1.75
SNF8-217ENST00000576353 CASD1Q96PB1 797 aa26■■□□□ 1.75
SNF8-217ENST00000576353 PLIN2Q99541 437 aa26■■□□□ 1.75
SNF8-217ENST00000576353 RNF19AQ9NV58 838 aa26■■□□□ 1.75
SNF8-217ENST00000576353 TYW1Q9NV66 732 aaKnown RBP26■■□□□ 1.75
SNF8-217ENST00000576353 PCDHB2Q9Y5E7 798 aa26■■□□□ 1.75
SNF8-217ENST00000576353 COL6A3P12111 3177 aa25.99■■□□□ 1.75
SNF8-217ENST00000576353 ATF7P17544 494 aaPredicted RBP25.99■■□□□ 1.75
SNF8-217ENST00000576353 MARCKSP29966 332 aaPredicted RBP25.99■■□□□ 1.75
SNF8-217ENST00000576353 CDCA2Q69YH5 1023 aaPredicted RBP25.99■■□□□ 1.75
SNF8-217ENST00000576353 RINT1Q6NUQ1 792 aa25.99■■□□□ 1.75
SNF8-217ENST00000576353 NOTUMQ6P988 496 aa25.99■■□□□ 1.75
SNF8-217ENST00000576353 SYT2Q8N9I0 419 aaPredicted RBP25.99■■□□□ 1.75
SNF8-217ENST00000576353 SPRYD3Q8NCJ5 442 aa25.99■■□□□ 1.75
SNF8-217ENST00000576353 BSNDQ8WZ55 320 aa25.99■■□□□ 1.75
SNF8-217ENST00000576353 P2RX5Q93086 422 aa25.99■■□□□ 1.75
SNF8-217ENST00000576353 ZNF396Q96N95 335 aaPredicted RBP25.99■■□□□ 1.75
SNF8-217ENST00000576353 USP28Q96RU2 1077 aa25.99■■□□□ 1.75
SNF8-217ENST00000576353 TIPINQ9BVW5 301 aa25.99■■□□□ 1.75
SNF8-217ENST00000576353 PCDHB12Q9Y5F1 795 aa25.99■■□□□ 1.75
SNF8-217ENST00000576353 SRPRBQ9Y5M8 271 aaKnown RBP25.99■■□□□ 1.75
SNF8-217ENST00000576353 MORC2Q9Y6X9 1032 aaPredicted RBP25.99■■□□□ 1.75
SNF8-217ENST00000576353 SSBP05455 408 aaKnown RBP eCLIP25.98■■□□□ 1.75
SNF8-217ENST00000576353 ZSCAN22P10073 491 aaPredicted RBP25.98■■□□□ 1.75
SNF8-217ENST00000576353 GRIN1Q05586 938 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 SLC39A14Q15043 492 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 AMHR2Q16671 573 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 CLLU1OSQ5K130 101 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 C1orf186Q6ZWK4 172 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 LRRC43Q8N309 656 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 CNNM3Q8NE01 707 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 RASSF8Q8NHQ8 419 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 MRPL38Q96DV4 380 aaKnown RBP25.98■■□□□ 1.75
SNF8-217ENST00000576353 PRIMPOLQ96LW4 560 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 DRC1Q96MC2 740 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 RUSC1Q9BVN2 902 aa25.98■■□□□ 1.75
SNF8-217ENST00000576353 PRMT7Q9NVM4 692 aaPredicted RBP25.98■■□□□ 1.75
SNF8-217ENST00000576353 FBXO2Q9UK22 296 aaPredicted RBP25.98■■□□□ 1.75
SNF8-217ENST00000576353 PLA2G4BP0C869 781 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 FAM187BQ17R55 369 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 UBXN11Q5T124 520 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 GLB1LQ6UWU2 654 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 PPP4R3CPQ6ZMV5 832 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 MRPL10Q7Z7H8 261 aaKnown RBP25.97■■□□□ 1.75
SNF8-217ENST00000576353 HELQQ8TDG4 1101 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 MRPL9Q9BYD2 267 aaKnown RBP25.97■■□□□ 1.75
SNF8-217ENST00000576353 LMAN2LQ9H0V9 348 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 CSRNP2Q9H175 543 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 FZD8Q9H461 694 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 KCND2Q9NZV8 630 aa25.97■■□□□ 1.75
SNF8-217ENST00000576353 HIP1RO75146 1068 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 ARF4P18085 180 aaPredicted RBP25.96■■□□□ 1.75
SNF8-217ENST00000576353 LAG3P18627 525 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 GUCY2CP25092 1073 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 EFNA5P52803 228 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 MAPK6Q16659 721 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 CSPP1Q1MSJ5 1256 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 CPB2Q96IY4 423 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 CCSER1Q9C0I3 900 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 C17orf75Q9HAS0 396 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 POLD4Q9HCU8 107 aa25.96■■□□□ 1.75
SNF8-217ENST00000576353 NASPP49321 788 aaPredicted RBP25.95■■□□□ 1.74
SNF8-217ENST00000576353 SLC12A3P55017 1021 aa25.95■■□□□ 1.74
SNF8-217ENST00000576353 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.95■■□□□ 1.74
SNF8-217ENST00000576353 KLHL23Q8NBE8 558 aa25.95■■□□□ 1.74
SNF8-217ENST00000576353 LPPQ93052 612 aa25.95■■□□□ 1.74
SNF8-217ENST00000576353 CWH43Q9H720 699 aa25.95■■□□□ 1.74
SNF8-217ENST00000576353 KCNG1Q9UIX4 513 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms