RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 FOXD4L4Q8WXT5 416 aaPredicted RBP14.71□□□□□ -0.06
RPAIN-216ENST00000575599 CDK5RAP3Q96JB5 506 aa14.71□□□□□ -0.06
RPAIN-216ENST00000575599 PLIN2Q99541 437 aa14.71□□□□□ -0.06
RPAIN-216ENST00000575599 TMEM161AQ9NX61 479 aa14.71□□□□□ -0.06
RPAIN-216ENST00000575599 DACT1Q9NYF0 836 aa14.71□□□□□ -0.06
RPAIN-216ENST00000575599 DNM3Q9UQ16 869 aa14.71□□□□□ -0.06
RPAIN-216ENST00000575599 RALGAPA2Q2PPJ7 1873 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 LRRIQ4A6NIV6 560 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 TBKBP1A7MCY6 615 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 INO80B-WBP1J3KQ70 363 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 GTPBP6O43824 516 aaPredicted RBP14.7□□□□□ -0.06
RPAIN-216ENST00000575599 ERLIN2O94905 339 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 CTNNB1P35222 781 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 GRIN1Q05586 938 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 CCDC85BQ15834 202 aaPredicted RBP14.7□□□□□ -0.06
RPAIN-216ENST00000575599 EPC2Q52LR7 807 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 ECHDC2Q86YB7 292 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 TMEM192Q8IY95 271 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 CMTR2Q8IYT2 770 aaKnown RBP14.7□□□□□ -0.06
RPAIN-216ENST00000575599 SAMD11Q96NU1 681 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 ZSCAN16Q9H4T2 348 aaPredicted RBP14.7□□□□□ -0.06
RPAIN-216ENST00000575599 CHST12Q9NRB3 414 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 AGPAT5Q9NUQ2 364 aa14.7□□□□□ -0.06
RPAIN-216ENST00000575599 MRPL42Q9Y6G3 142 aaKnown RBP14.7□□□□□ -0.06
RPAIN-216ENST00000575599 LPXNO60711 386 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 EYA4O95677 639 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 CYP11B2P19099 503 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 MARCKSP29966 332 aaPredicted RBP14.69□□□□□ -0.06
RPAIN-216ENST00000575599 TIE1P35590 1138 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 PTENP60484 403 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 FAM189BP81408 668 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 KCNK18Q7Z418 384 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 CABP7Q86V35 215 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 RASSF8Q8NHQ8 419 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 KIF12Q96FN5 646 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 AK8Q96MA6 479 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 PNMA5Q96PV4 448 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 ELAC1Q9H777 363 aaKnown RBP14.69□□□□□ -0.06
RPAIN-216ENST00000575599 POLD4Q9HCU8 107 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 KIAA1671Q9BY89 1806 aa14.69□□□□□ -0.06
RPAIN-216ENST00000575599 FNDC1Q4ZHG4 1894 aaPredicted RBP14.68□□□□□ -0.06
RPAIN-216ENST00000575599 A0A0U1RQF3 1178 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 SSBP05455 408 aaKnown RBP eCLIP14.68□□□□□ -0.06
RPAIN-216ENST00000575599 UBA7P41226 1012 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 MBTD1Q05BQ5 628 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 PTPAQ15257 358 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 LONRF3Q496Y0 759 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 SPOUT1Q5T280 376 aaKnown RBP14.68□□□□□ -0.06
RPAIN-216ENST00000575599 ABI1Q8IZP0 508 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 BSNDQ8WZ55 320 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 USP28Q96RU2 1077 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 NT5C3AQ9H0P0 336 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 FAM105AQ9NUU6 356 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 RWDD3Q9Y3V2 267 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 MTCH2Q9Y6C9 303 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 MYH15Q9Y2K3 1946 aa14.68□□□□□ -0.06
RPAIN-216ENST00000575599 HOXA2O43364 376 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 TSPAN1O60635 241 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 LINC00271P0C7V0 271 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 ATF7P17544 494 aaPredicted RBP14.67□□□□□ -0.06
RPAIN-216ENST00000575599 LONP1P36776 959 aaKnown RBP14.67□□□□□ -0.06
RPAIN-216ENST00000575599 POU5F1BQ06416 359 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 GPM6BQ13491 265 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 TMEM119Q4V9L6 283 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 HYIQ5T013 277 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 IFNLR1Q8IU57 520 aaPredicted RBP14.67□□□□□ -0.06
RPAIN-216ENST00000575599 ZBTB8OSQ8IWT0 167 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 CLP1Q92989 425 aaKnown RBP14.67□□□□□ -0.06
RPAIN-216ENST00000575599 LPPQ93052 612 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 CALML4Q96GE6 196 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 CPB2Q96IY4 423 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 RUSC1Q9BVN2 902 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 RNF19AQ9NV58 838 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 HCSTQ9UBK5 93 aa14.67□□□□□ -0.06
RPAIN-216ENST00000575599 CSPG5O95196 566 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 LIG1P18858 919 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 HOXA11P31270 313 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-216ENST00000575599 DDIT3P35638 169 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 BMPR1AP36894 532 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 RAB27AP51159 221 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 FOXD4L6Q3SYB3 417 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-216ENST00000575599 CLLU1OSQ5K130 101 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 SPECC1Q5M775 1068 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 FOXD4L3Q6VB84 417 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-216ENST00000575599 ZNF598Q86UK7 904 aaKnown RBP14.66□□□□□ -0.06
RPAIN-216ENST00000575599 DEPTORQ8TB45 409 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 HELQQ8TDG4 1101 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 KIFAP3Q92845 792 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 IFT74Q96LB3 600 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 C11orf84Q9BUA3 381 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-216ENST00000575599 KIFC3Q9BVG8 833 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 NFKBIZQ9BYH8 718 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 TMEM117Q9H0C3 514 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 CSRNP2Q9H175 543 aa14.66□□□□□ -0.06
RPAIN-216ENST00000575599 FBXO2Q9UK22 296 aaPredicted RBP14.66□□□□□ -0.06
RPAIN-216ENST00000575599 C5orf67F2Z3F1 127 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 H3BNC9 293 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 B4GALT5O43286 388 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 HIP1RO75146 1068 aa14.65□□□□□ -0.06
RPAIN-216ENST00000575599 EOMESO95936 686 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms