RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 TSHZ2Q9NRE2 1034 aa7.35□□□□□ -1.23
POLR2A-204ENST00000575547 FAM105AQ9NUU6 356 aa7.35□□□□□ -1.23
POLR2A-204ENST00000575547 ORC3Q9UBD5 711 aaPredicted RBP7.35□□□□□ -1.23
POLR2A-204ENST00000575547 NR2E1Q9Y466 385 aa7.35□□□□□ -1.23
POLR2A-204ENST00000575547 C2orf71A6NGG8 1288 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 SPDYE4A6NLX3 237 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 ASAP2O43150 1006 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 SLC37A4O43826 429 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 PFKFB2O60825 505 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 CLASP2O75122 1294 aaKnown RBP7.34□□□□□ -1.23
POLR2A-204ENST00000575547 OFD1O75665 1012 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 GALTP07902 379 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 GCFC2P16383 781 aaKnown RBP7.34□□□□□ -1.23
POLR2A-204ENST00000575547 SP100P23497 879 aaPredicted RBP7.34□□□□□ -1.23
POLR2A-204ENST00000575547 RFC5P40937 340 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 NCBP1Q09161 790 aaKnown RBP7.34□□□□□ -1.23
POLR2A-204ENST00000575547 SCRN1Q12765 414 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 PPP2R5CQ13362 524 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 GIT2Q14161 759 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 ANKRD1Q15327 319 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 EPHA7Q15375 998 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 XKR9Q5GH70 373 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 NOMO2Q5JPE7 1267 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 ATAT1Q5SQI0 421 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 NCAPH2Q6IBW4 605 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 PPP4R3AQ6IN85 833 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 SYCE2Q6PIF2 218 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 B3GNT9Q6UX72 402 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 TPH2Q8IWU9 490 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 TCP11Q8WWU5 503 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 PRPF31Q8WWY3 499 aaKnown RBP7.34□□□□□ -1.23
POLR2A-204ENST00000575547 PSPC1Q8WXF1 523 aaKnown RBP7.34□□□□□ -1.23
POLR2A-204ENST00000575547 RSPH1Q8WYR4 309 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 SUSD6Q92537 303 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 CEP89Q96ST8 783 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 PHF20Q9BVI0 1012 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 ADAM7Q9H2U9 754 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 NRDE2Q9H7Z3 1164 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 BRMS1Q9HCU9 246 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 KANSL3Q9P2N6 904 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 TPCN1Q9ULQ1 816 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 FAN1Q9Y2M0 1017 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 PPME1Q9Y570 386 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 PCDHB2Q9Y5E7 798 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 COL4A3BPQ9Y5P4 624 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 PLXNA4Q9HCM2 1894 aa7.34□□□□□ -1.23
POLR2A-204ENST00000575547 KIAA1671Q9BY89 1806 aa7.34□□□□□ -1.24
POLR2A-204ENST00000575547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 TBX3O15119 743 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 DTNBO60941 627 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 ZNF623O75123 536 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 YWHABP31946 246 aaKnown RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 KRT2P35908 639 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 MTHFRP42898 656 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 RAB27AP51159 221 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 CYP4A11Q02928 519 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 ITIH3Q06033 890 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 SIGLEC14Q08ET2 396 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 LAMTOR4Q0VGL1 99 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 KCNC3Q14003 757 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 TRIM29Q14134 588 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 CTTNQ14247 550 aaKnown RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 NPY5RQ15761 445 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 RARS2Q5T160 578 aaKnown RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 BMP8AQ7Z5Y6 402 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 SRGAP1Q7Z6B7 1085 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 DDX53Q86TM3 631 aaKnown RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 PPFIBP1Q86W92 1011 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 C4orf19Q8IY42 314 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 SLFN12Q8IYM2 578 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 C12orf76Q8N812 135 aaPredicted RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 NECAB1Q8N987 351 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 ZNF579Q8NAF0 562 aaKnown RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 OXER1Q8TDS5 423 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 AUTS2Q8WXX7 1259 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 IGSF21Q96ID5 467 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 DYDC2Q96IM9 177 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 RIPOR3Q96MK2 946 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 CCDC43Q96MW1 224 aaKnown RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 NECTIN4Q96NY8 510 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 PRRX2Q99811 253 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 TRAIPQ9BWF2 469 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 EMILIN2Q9BXX0 1053 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 ZSWIM4Q9H7M6 989 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 IFT122Q9HBG6 1241 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 BMP2KQ9NSY1 1161 aaPredicted RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 GJB4Q9NTQ9 266 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 TBC1D13Q9NVG8 400 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 RGL1Q9NZL6 768 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 DBR1Q9UK59 544 aaKnown RBP7.33□□□□□ -1.24
POLR2A-204ENST00000575547 VAV3Q9UKW4 847 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 HCFC2Q9Y5Z7 792 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 ATG2AQ2TAZ0 1938 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 WDR81Q562E7 1941 aa7.33□□□□□ -1.24
POLR2A-204ENST00000575547 C5orf42Q9H799 3197 aa7.32□□□□□ -1.24
POLR2A-204ENST00000575547 MEIS3P2A8K0S8 358 aa7.32□□□□□ -1.24
POLR2A-204ENST00000575547 GAS2O43903 313 aaKnown RBP7.32□□□□□ -1.24
POLR2A-204ENST00000575547 ERLIN2O94905 339 aa7.32□□□□□ -1.24
POLR2A-204ENST00000575547 POMCP01189 267 aa7.32□□□□□ -1.24
POLR2A-204ENST00000575547 SSBP05455 408 aaKnown RBP eCLIP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms