RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ZNF410Q86VK4 478 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 TMEM173Q86WV6 379 aaPredicted RBP10.14□□□□□ -0.79
SMG6-218ENST00000575454 REXO1Q8N1G1 1221 aaKnown RBP10.14□□□□□ -0.79
SMG6-218ENST00000575454 BICD2Q8TD16 824 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 RIT2Q99578 217 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 JPH2Q9BR39 696 aaPredicted RBP10.14□□□□□ -0.79
SMG6-218ENST00000575454 TMEM175Q9BSA9 504 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 LRRC2Q9BYS8 371 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 NRDE2Q9H7Z3 1164 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 WDR6Q9NNW5 1121 aaKnown RBP10.14□□□□□ -0.79
SMG6-218ENST00000575454 EPS15L1Q9UBC2 864 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 PIN4Q9Y237 131 aaKnown RBP10.14□□□□□ -0.79
SMG6-218ENST00000575454 PLXNA3P51805 1871 aa10.14□□□□□ -0.79
SMG6-218ENST00000575454 ZNF862O60290 1169 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 OFD1O75665 1012 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 ADH1AP07327 375 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 CNPP09543 421 aaKnown RBP10.13□□□□□ -0.79
SMG6-218ENST00000575454 SRFP11831 508 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 SDHBP21912 280 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 FGFR4P22455 802 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 GBP2P32456 591 aaPredicted RBP10.13□□□□□ -0.79
SMG6-218ENST00000575454 SLC11A1P49279 550 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 PFKFB3Q16875 520 aaPredicted RBP10.13□□□□□ -0.79
SMG6-218ENST00000575454 XKR3Q5GH77 459 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 CATSPER4Q7RTX7 472 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 RDM1Q8NG50 284 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 EXOC6Q8TAG9 804 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 HDAC7Q8WUI4 952 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 RUBCNQ92622 972 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 RMDN1Q96DB5 314 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 ZNF668Q96K58 619 aaPredicted RBP10.13□□□□□ -0.79
SMG6-218ENST00000575454 FAM193BQ96PV7 902 aaPredicted RBP10.13□□□□□ -0.79
SMG6-218ENST00000575454 HINFPQ9BQA5 517 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 NIFKQ9BYG3 293 aaKnown RBP10.13□□□□□ -0.79
SMG6-218ENST00000575454 LSG1Q9H089 658 aaKnown RBP10.13□□□□□ -0.79
SMG6-218ENST00000575454 ZMYND12Q9H0C1 365 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 GBP3Q9H0R5 595 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 UBN1Q9NPG3 1134 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 FAM105AQ9NUU6 356 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMG6-218ENST00000575454 INPP5FQ9Y2H2 1132 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 FAN1Q9Y2M0 1017 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 SIT1Q9Y3P8 196 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 ATRXP46100 2492 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 ATG2AQ2TAZ0 1938 aa10.13□□□□□ -0.79
SMG6-218ENST00000575454 LAMA4Q16363 1823 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 CNTNAP2Q9UHC6 1331 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 USP24Q9UPU5 2620 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 IGKV6-21A0A0C4DH24 114 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 CCDC195A0A1B0GUA6 201 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 GOLGA8AA7E2F4 631 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 GOLGA8BA8MQT2 603 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 GAS7O60861 476 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 LILRB3O75022 631 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 NR1I2O75469 434 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 CSDE1O75534 798 aaKnown RBP10.12□□□□□ -0.79
SMG6-218ENST00000575454 GLUD1P00367 558 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 SOD2P04179 222 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 URODP06132 367 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 CFHP08603 1231 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 USP11P51784 963 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 NECTIN1Q15223 517 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 TARBP2Q15633 366 aaKnown RBP10.12□□□□□ -0.79
SMG6-218ENST00000575454 DHX32Q7L7V1 743 aaKnown RBP10.12□□□□□ -0.79
SMG6-218ENST00000575454 C1orf210Q8IVY1 113 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 EXOC8Q8IYI6 725 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 KIAA2013Q8IYS2 634 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 SLC44A3Q8N4M1 653 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 BCL7CQ8WUZ0 217 aaPredicted RBP10.12□□□□□ -0.79
SMG6-218ENST00000575454 LPPQ93052 612 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 SHDQ96IW2 340 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 RPS6KC1Q96S38 1066 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 TBC1D17Q9HA65 648 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 MAN1C1Q9NR34 630 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 SUCLA2Q9P2R7 463 aaPredicted RBP10.12□□□□□ -0.79
SMG6-218ENST00000575454 PCDHB2Q9Y5E7 798 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 NLRC5Q86WI3 1866 aa10.12□□□□□ -0.79
SMG6-218ENST00000575454 MAP1BP46821 2468 aaKnown RBP10.11□□□□□ -0.79
SMG6-218ENST00000575454 A0A087WZ62 844 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 KRBA1A5PL33 1030 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 NARSO43776 548 aaKnown RBP10.11□□□□□ -0.79
SMG6-218ENST00000575454 SSBP05455 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMG6-218ENST00000575454 HMGB1P09429 215 aaKnown RBP10.11□□□□□ -0.79
SMG6-218ENST00000575454 AK2P54819 239 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 AKAP17AQ02040 695 aaKnown RBP10.11□□□□□ -0.79
SMG6-218ENST00000575454 MRPL10Q7Z7H8 261 aaKnown RBP10.11□□□□□ -0.79
SMG6-218ENST00000575454 RHPN2Q8IUC4 686 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 GPR161Q8N6U8 529 aaKnown RBP10.11□□□□□ -0.79
SMG6-218ENST00000575454 CNNM3Q8NE01 707 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 CCDC148Q8NFR7 591 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 CCDC136Q96JN2 1154 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 FDXACB1Q9BRP7 624 aaPredicted RBP10.11□□□□□ -0.79
SMG6-218ENST00000575454 VN1R3Q9BXE9 311 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 TEKT3Q9BXF9 490 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 C22orf23Q9BZE7 217 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 PLEKHA4Q9H4M7 779 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 RSAD1Q9HA92 442 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 ANO2Q9NQ90 1003 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 ARHGEF3Q9NR81 526 aa10.11□□□□□ -0.79
SMG6-218ENST00000575454 DLL3Q9NYJ7 618 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms