RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 MYPNQ86TC9 1320 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 ST20-MTHFSA0A0A6YYL1 179 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 TLDC2A0PJX2 215 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 UBE2QL1A1L167 161 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 CAPN14A8MX76 684 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 PLSCR1O15162 318 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 TGM5O43548 720 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 OPHN1O60890 802 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 TOX4O94842 621 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 FSBPO95073 299 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 MAP4K4O95819 1239 aaPredicted RBP4.47□□□□□ -1.69
NUP88-209ENST00000574855 JUNP05412 331 aaKnown RBP4.47□□□□□ -1.69
NUP88-209ENST00000574855 VSIG10L2P0DP72 767 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 HNRNPLP14866 589 aaKnown RBP eCLIP4.47□□□□□ -1.69
NUP88-209ENST00000574855 KIR2DL3P43628 341 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 LSSP48449 732 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 ANAPC15P60006 121 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 IL2P60568 153 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 PHC1P78364 1004 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 CCDC181Q5TID7 509 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 EGFLAMQ63HQ2 1017 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 KRT40Q6A162 431 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 FAM111BQ6SJ93 734 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 GAREM2Q75VX8 874 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 ANKRD35Q8N283 1001 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 ZNF610Q8N9Z0 462 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 SLC16A11Q8NCK7 471 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 ZNF496Q96IT1 587 aaPredicted RBP4.47□□□□□ -1.69
NUP88-209ENST00000574855 GPHA2Q96T91 129 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 CSRNP2Q9H175 543 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 C14orf93Q9H972 538 aaKnown RBP4.47□□□□□ -1.69
NUP88-209ENST00000574855 SPTLC3Q9NUV7 552 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 SRRDQ9UH36 339 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 KCNG1Q9UIX4 513 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 RCAN3Q9UKA8 241 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 GIT1Q9Y2X7 761 aa4.47□□□□□ -1.69
NUP88-209ENST00000574855 ELL2O00472 640 aaPredicted RBP4.46□□□□□ -1.7
NUP88-209ENST00000574855 AKAP8O43823 692 aaKnown RBP4.46□□□□□ -1.7
NUP88-209ENST00000574855 PEX14O75381 377 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 PCDH8O95206 1070 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 FKBP9O95302 570 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 PARNO95453 639 aaKnown RBP4.46□□□□□ -1.7
NUP88-209ENST00000574855 MYCLP1P12525 358 aaPredicted RBP4.46□□□□□ -1.7
NUP88-209ENST00000574855 XPAP23025 273 aaPredicted RBP4.46□□□□□ -1.7
NUP88-209ENST00000574855 ACRV1P26436 265 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 GYS2P54840 703 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 SEPT7Q16181 437 aaKnown RBP4.46□□□□□ -1.7
NUP88-209ENST00000574855 PLEKHG4Q58EX7 1191 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 FRMD7Q6ZUT3 714 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 FKBP9P1Q75LS8 142 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 GSPT2Q8IYD1 628 aaKnown RBP4.46□□□□□ -1.7
NUP88-209ENST00000574855 MORC4Q8TE76 937 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 LEO1Q8WVC0 666 aaPredicted RBP4.46□□□□□ -1.7
NUP88-209ENST00000574855 FERMT2Q96AC1 680 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 ZNF503Q96F45 646 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 UIMC1Q96RL1 719 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 TCF25Q9BQ70 676 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 IL23AQ9NPF7 189 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 MAPRE3Q9UPY8 281 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 SH3BP1Q9Y3L3 701 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 TBX22Q9Y458 520 aa4.46□□□□□ -1.7
NUP88-209ENST00000574855 A0A087X0B3 334 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 A0A0A6YYK5 440 aaPredicted RBP4.45□□□□□ -1.7
NUP88-209ENST00000574855 GSG1L2A8MUP6 293 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 PDE8AO60658 829 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 ADCYAP1R1P41586 468 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 NPEPPSP55786 919 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 IGBP1P78318 339 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 KRTAP1-1Q07627 177 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 TERF2Q15554 542 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 PTPROQ16827 1216 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 MIIPQ5JXC2 388 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 SPTY2D1Q68D10 685 aaPredicted RBP4.45□□□□□ -1.7
NUP88-209ENST00000574855 SDE2Q6IQ49 451 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 APBB1IPQ7Z5R6 666 aaPredicted RBP4.45□□□□□ -1.7
NUP88-209ENST00000574855 CMTM4Q8IZR5 234 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 Q8N1X5 172 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 CDYL2Q8N8U2 506 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 ARL8AQ96BM9 186 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 MIEF2Q96C03 454 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 PLEKHG4BQ96PX9 1271 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 SOX7Q9BT81 388 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 USP18Q9UMW8 372 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 PCDHB6Q9Y5E3 794 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 HS3ST3A1Q9Y663 406 aa4.45□□□□□ -1.7
NUP88-209ENST00000574855 hCG_2014768A0A024R1R8 64 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 CYR61O00622 381 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 MFAP3LO75121 409 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 ACVRL1P37023 503 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 GPR15P49685 360 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 ADAM8P78325 824 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 PTH1RQ03431 593 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 DHCR24Q15392 516 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 DDB1Q16531 1140 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 ATP13A4Q4VNC1 1196 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 BROXQ5VW32 411 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 MFSD5Q6N075 450 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 DDX46Q7L014 1031 aaKnown RBP4.44□□□□□ -1.7
NUP88-209ENST00000574855 IL17DQ8TAD2 202 aa4.44□□□□□ -1.7
NUP88-209ENST00000574855 PPP1R14CQ8TAE6 165 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms