RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 PLA2G15Q8NCC3 412 aa6.45□□□□□ -1.38
NUP88-208ENST00000574087 PIK3C3Q8NEB9 887 aa6.45□□□□□ -1.38
NUP88-208ENST00000574087 OR14K1Q8NGZ2 314 aa6.45□□□□□ -1.38
NUP88-208ENST00000574087 TSPEARQ8WU66 669 aa6.45□□□□□ -1.38
NUP88-208ENST00000574087 AUTS2Q8WXX7 1259 aa6.45□□□□□ -1.38
NUP88-208ENST00000574087 NEIL1Q96FI4 390 aaPredicted RBP6.45□□□□□ -1.38
NUP88-208ENST00000574087 SSBP3Q9BWW4 388 aaPredicted RBP6.45□□□□□ -1.38
NUP88-208ENST00000574087 JADE2Q9NQC1 790 aa6.45□□□□□ -1.38
NUP88-208ENST00000574087 DNAJC28Q9NX36 388 aa6.45□□□□□ -1.38
NUP88-208ENST00000574087 DPP7Q9UHL4 492 aa6.45□□□□□ -1.38
NUP88-208ENST00000574087 TNKSO95271 1327 aa6.45□□□□□ -1.38
NUP88-208ENST00000574087 A0A1W2PR48 441 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 PMS2P1A4D2B8 440 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 DAPK3O43293 454 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 PDGFRBP09619 1106 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 RBP3P10745 1247 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 NRG3P56975 720 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 RAC3P60763 192 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 ADAM8P78325 824 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 ATP2C1P98194 919 aaPredicted RBP6.44□□□□□ -1.38
NUP88-208ENST00000574087 MGAT5Q09328 741 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 ABCB5Q2M3G0 1257 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 KRTAP1-3Q8IUG1 177 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 GLB1L2Q8IW92 636 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 FAXDC2Q96IV6 333 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 SLC6A15Q9H2J7 730 aa6.44□□□□□ -1.38
NUP88-208ENST00000574087 ZNF277Q9NRM2 450 aaPredicted RBP6.44□□□□□ -1.38
NUP88-208ENST00000574087 RBM8AQ9Y5S9 174 aaKnown RBP6.44□□□□□ -1.38
NUP88-208ENST00000574087 MT-CO1P00395 513 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 CFBP00751 764 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 KIR2DL3P43628 341 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 CDK17Q00537 523 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 TCIRG1Q13488 830 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 NFIXQ14938 502 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 ACAP1Q15027 740 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 PGM2L1Q6PCE3 622 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 LMBR1LQ6UX01 489 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 RABGGTAQ92696 567 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 GCDHQ92947 438 aaPredicted RBP6.43□□□□□ -1.38
NUP88-208ENST00000574087 FUBP3Q96I24 572 aaKnown RBP eCLIP6.43□□□□□ -1.38
NUP88-208ENST00000574087 UIMC1Q96RL1 719 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 LMF1Q96S06 567 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 RBM15Q96T37 977 aaKnown RBP eCLIP6.43□□□□□ -1.38
NUP88-208ENST00000574087 IFT122Q9HBG6 1241 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 MSL2Q9HCI7 577 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 PUF60Q9UHX1 559 aaKnown RBP6.43□□□□□ -1.38
NUP88-208ENST00000574087 OAZ3Q9UMX2 235 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 SPEF1Q9Y4P9 236 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 GPR45Q9Y5Y3 372 aa6.43□□□□□ -1.38
NUP88-208ENST00000574087 SHTN1A0MZ66 631 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 SLC26A4O43511 780 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 PCDHGA12O60330 932 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 TMEM127O75204 238 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 MYBL2P10244 700 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 CR2P20023 1033 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 AGXTP21549 392 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 KRT85P78386 507 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 DUSP8Q13202 625 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 ANO4Q32M45 955 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 GAGE13Q4V321 117 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 TAS1R1Q7RTX1 841 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 AMOTL1Q8IY63 956 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 ANKRD13AQ8IZ07 590 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 DPYSL5Q9BPU6 564 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 C14orf93Q9H972 538 aaKnown RBP6.42□□□□□ -1.38
NUP88-208ENST00000574087 SCOCQ9UIL1 159 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 PCDHGA9Q9Y5G4 932 aaKnown RBP6.42□□□□□ -1.38
NUP88-208ENST00000574087 PCDHGA8Q9Y5G5 932 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 PCDHGA7Q9Y5G6 932 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 PCDHGA6Q9Y5G7 932 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 PCDHGA3Q9Y5H0 932 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 PCDHGA2Q9Y5H1 932 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 ZNF536O15090 1300 aa6.42□□□□□ -1.38
NUP88-208ENST00000574087 NPEPPSL1A6NEC2 478 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 GPR42O15529 346 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 MTSS1O43312 755 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 TOX4O94842 621 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 ITGB3P05106 788 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 VSIG10L2P0DP72 767 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 OSMP13725 252 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 CTSWP56202 376 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 BPIFB4P59827 614 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 MEF2AQ02078 507 aaPredicted RBP6.41□□□□□ -1.38
NUP88-208ENST00000574087 PCBP2Q15366 365 aaKnown RBP eCLIP6.41□□□□□ -1.38
NUP88-208ENST00000574087 ADRM1Q16186 407 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 TAX1BP1Q86VP1 789 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 ANKRD53Q8N9V6 530 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 CXorf38Q8TB03 319 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 SSH1Q8WYL5 1049 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 FATE1Q969F0 183 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 LRRC37BQ96QE4 947 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 GPHA2Q96T91 129 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 SLC13A1Q9BZW2 595 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 MKS1Q9NXB0 559 aa6.41□□□□□ -1.38
NUP88-208ENST00000574087 ALDH1A2O94788 518 aa6.4□□□□□ -1.38
NUP88-208ENST00000574087 LTA4HP09960 611 aaKnown RBP6.4□□□□□ -1.38
NUP88-208ENST00000574087 SLC5A3P53794 718 aa6.4□□□□□ -1.38
NUP88-208ENST00000574087 CCT2P78371 535 aaKnown RBP6.4□□□□□ -1.38
NUP88-208ENST00000574087 SAFB2Q14151 953 aaKnown RBP eCLIP6.4□□□□□ -1.38
NUP88-208ENST00000574087 UBE3CQ15386 1083 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms