RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 LRRC15Q8TF66 581 aa30.78■■■□□ 2.52
SCARF1-207ENST00000573867 CASD1Q96PB1 797 aa30.78■■■□□ 2.52
SCARF1-207ENST00000573867 PLIN2Q99541 437 aa30.78■■■□□ 2.52
SCARF1-207ENST00000573867 NFKBIZQ9BYH8 718 aa30.78■■■□□ 2.52
SCARF1-207ENST00000573867 DNM3Q9UQ16 869 aa30.78■■■□□ 2.52
SCARF1-207ENST00000573867 PRRC2BQ5JSZ5 2229 aaKnown RBP30.78■■■□□ 2.52
SCARF1-207ENST00000573867 GTPBP6O43824 516 aaPredicted RBP30.77■■■□□ 2.52
SCARF1-207ENST00000573867 GPM6BQ13491 265 aa30.77■■■□□ 2.52
SCARF1-207ENST00000573867 TMEM119Q4V9L6 283 aa30.77■■■□□ 2.52
SCARF1-207ENST00000573867 UBXN11Q5T124 520 aa30.77■■■□□ 2.52
SCARF1-207ENST00000573867 SPRYD3Q8NCJ5 442 aa30.77■■■□□ 2.52
SCARF1-207ENST00000573867 USP28Q96RU2 1077 aa30.77■■■□□ 2.52
SCARF1-207ENST00000573867 RUSC1Q9BVN2 902 aa30.77■■■□□ 2.52
SCARF1-207ENST00000573867 FAM105AQ9NUU6 356 aa30.77■■■□□ 2.52
SCARF1-207ENST00000573867 RNF216Q9NWF9 866 aaPredicted RBP30.77■■■□□ 2.52
SCARF1-207ENST00000573867 MEIS3P2A8K0S8 358 aa30.76■■■□□ 2.51
SCARF1-207ENST00000573867 INO80B-WBP1J3KQ70 363 aa30.76■■■□□ 2.51
SCARF1-207ENST00000573867 LRRC55Q6ZSA7 311 aa30.76■■■□□ 2.51
SCARF1-207ENST00000573867 CABP7Q86V35 215 aa30.76■■■□□ 2.51
SCARF1-207ENST00000573867 LPPQ93052 612 aa30.76■■■□□ 2.51
SCARF1-207ENST00000573867 TMEM117Q9H0C3 514 aa30.76■■■□□ 2.51
SCARF1-207ENST00000573867 LRRIQ4A6NIV6 560 aa30.75■■■□□ 2.51
SCARF1-207ENST00000573867 EOMESO95936 686 aa30.75■■■□□ 2.51
SCARF1-207ENST00000573867 CEBPZQ03701 1054 aaKnown RBP30.75■■■□□ 2.51
SCARF1-207ENST00000573867 LONRF3Q496Y0 759 aa30.75■■■□□ 2.51
SCARF1-207ENST00000573867 CDCA2Q69YH5 1023 aaPredicted RBP30.75■■■□□ 2.51
SCARF1-207ENST00000573867 DAW1Q8N136 415 aa30.75■■■□□ 2.51
SCARF1-207ENST00000573867 CPB2Q96IY4 423 aa30.75■■■□□ 2.51
SCARF1-207ENST00000573867 AK8Q96MA6 479 aa30.75■■■□□ 2.51
SCARF1-207ENST00000573867 CWH43Q9H720 699 aa30.75■■■□□ 2.51
SCARF1-207ENST00000573867 FBXO2Q9UK22 296 aaPredicted RBP30.75■■■□□ 2.51
SCARF1-207ENST00000573867 B4GALT5O43286 388 aa30.74■■■□□ 2.51
SCARF1-207ENST00000573867 RB1P06400 928 aa30.74■■■□□ 2.51
SCARF1-207ENST00000573867 MARCKSP29966 332 aaPredicted RBP30.74■■■□□ 2.51
SCARF1-207ENST00000573867 HELQQ8TDG4 1101 aa30.74■■■□□ 2.51
SCARF1-207ENST00000573867 ZSCAN16Q9H4T2 348 aaPredicted RBP30.74■■■□□ 2.51
SCARF1-207ENST00000573867 TYW1Q9NV66 732 aaKnown RBP30.74■■■□□ 2.51
SCARF1-207ENST00000573867 LMCD1Q9NZU5 365 aa30.74■■■□□ 2.51
SCARF1-207ENST00000573867 RWDD3Q9Y3V2 267 aa30.74■■■□□ 2.51
SCARF1-207ENST00000573867 XIRP2A4UGR9 3374 aa30.74■■■□□ 2.51
SCARF1-207ENST00000573867 GRM6O15303 877 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 ZNF623O75123 536 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 ERLIN2O94905 339 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 HSP90AA1P07900 732 aaKnown RBP30.73■■■□□ 2.51
SCARF1-207ENST00000573867 MAPK7Q13164 816 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 PKP1Q13835 747 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 FOXD4L5Q5VV16 416 aaPredicted RBP30.73■■■□□ 2.51
SCARF1-207ENST00000573867 RINT1Q6NUQ1 792 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 C1orf186Q6ZWK4 172 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 USP49Q70CQ1 688 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 SLC17A8Q8NDX2 589 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 FOXD4L4Q8WXT5 416 aaPredicted RBP30.73■■■□□ 2.51
SCARF1-207ENST00000573867 KIFC3Q9BVG8 833 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 PCDHB2Q9Y5E7 798 aa30.73■■■□□ 2.51
SCARF1-207ENST00000573867 SPTBN5Q9NRC6 3674 aaKnown RBP30.73■■■□□ 2.51
SCARF1-207ENST00000573867 A0A0C4DFX4 3053 aa30.72■■■□□ 2.51
SCARF1-207ENST00000573867 HOXA2O43364 376 aa30.72■■■□□ 2.51
SCARF1-207ENST00000573867 ARF4P18085 180 aaPredicted RBP30.72■■■□□ 2.51
SCARF1-207ENST00000573867 LONP1P36776 959 aaKnown RBP30.72■■■□□ 2.51
SCARF1-207ENST00000573867 EIF2AQ9BY44 585 aaKnown RBP30.72■■■□□ 2.51
SCARF1-207ENST00000573867 TTLL13PA6NNM8 815 aa30.71■■■□□ 2.51
SCARF1-207ENST00000573867 EDN1P05305 212 aa30.71■■■□□ 2.51
SCARF1-207ENST00000573867 NAMPTP43490 491 aa30.71■■■□□ 2.51
SCARF1-207ENST00000573867 SLC12A3P55017 1021 aa30.71■■■□□ 2.51
SCARF1-207ENST00000573867 PCBP1Q15365 356 aaKnown RBP eCLIP30.71■■■□□ 2.51
SCARF1-207ENST00000573867 SPECC1Q5M775 1068 aa30.71■■■□□ 2.51
SCARF1-207ENST00000573867 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.71■■■□□ 2.51
SCARF1-207ENST00000573867 MRPL38Q96DV4 380 aaKnown RBP30.71■■■□□ 2.51
SCARF1-207ENST00000573867 C11orf84Q9BUA3 381 aaPredicted RBP30.71■■■□□ 2.51
SCARF1-207ENST00000573867 PLVAPQ9BX97 442 aa30.71■■■□□ 2.51
SCARF1-207ENST00000573867 NT5C3AQ9H0P0 336 aa30.71■■■□□ 2.51
SCARF1-207ENST00000573867 CSRNP2Q9H175 543 aa30.71■■■□□ 2.51
SCARF1-207ENST00000573867 HIP1RO75146 1068 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 UBA7P41226 1012 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 RAB27AP51159 221 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 KARSQ15046 597 aaKnown RBP30.7■■■□□ 2.51
SCARF1-207ENST00000573867 AGMOQ6ZNB7 445 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 MRPL10Q7Z7H8 261 aaKnown RBP30.7■■■□□ 2.51
SCARF1-207ENST00000573867 CDR2LQ86X02 465 aaPredicted RBP30.7■■■□□ 2.51
SCARF1-207ENST00000573867 SYT2Q8N9I0 419 aaPredicted RBP30.7■■■□□ 2.51
SCARF1-207ENST00000573867 KLHL23Q8NBE8 558 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 SMG8Q8ND04 991 aaKnown RBP30.7■■■□□ 2.51
SCARF1-207ENST00000573867 KIFAP3Q92845 792 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 CDK5RAP3Q96JB5 506 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 CLIC6Q96NY7 704 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 CCDC113Q9H0I3 377 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 FZD8Q9H461 694 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 ALG13Q9NP73 1137 aaKnown RBP30.7■■■□□ 2.51
SCARF1-207ENST00000573867 PLAGL2Q9UPG8 496 aa30.7■■■□□ 2.51
SCARF1-207ENST00000573867 SRPRBQ9Y5M8 271 aaKnown RBP30.7■■■□□ 2.51
SCARF1-207ENST00000573867 ATG2AQ2TAZ0 1938 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 ITGB1P05556 798 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 PLA2G4BP0C869 781 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 SKIP12755 728 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 DNAJB1P25685 340 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 AXLP30530 894 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 CAMK1Q14012 370 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 PPP4R3CPQ6ZMV5 832 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 ABI1Q8IZP0 508 aa30.69■■■□□ 2.5
SCARF1-207ENST00000573867 P2RX5Q93086 422 aa30.69■■■□□ 2.5
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