RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 PHF20Q9BVI0 1012 aa24.66■■□□□ 1.54
SNF8-216ENST00000573795 ADAM7Q9H2U9 754 aa24.66■■□□□ 1.54
SNF8-216ENST00000573795 CYP26B1Q9NR63 512 aa24.66■■□□□ 1.54
SNF8-216ENST00000573795 ZNF623O75123 536 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 OFD1O75665 1012 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 VCPP55072 806 aaKnown RBP24.65■■□□□ 1.54
SNF8-216ENST00000573795 TCF15Q12870 199 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 LETM2Q2VYF4 491 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 TPRNQ4KMQ1 711 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 CATSPER4Q7RTX7 472 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 DENND4AQ7Z401 1863 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 VPS52Q8N1B4 723 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 RSPH1Q8WYR4 309 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 IGSF21Q96ID5 467 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 VN1R3Q9BXE9 311 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 INO80BQ9C086 356 aaPredicted RBP24.65■■□□□ 1.54
SNF8-216ENST00000573795 MYO10Q9HD67 2058 aa24.65■■□□□ 1.54
SNF8-216ENST00000573795 DTNBO60941 627 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 CXCL14O95715 111 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 GALTP07902 379 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 QARSP47897 775 aaKnown RBP24.64■■□□□ 1.54
SNF8-216ENST00000573795 SCRN1Q12765 414 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 NOMO2Q5JPE7 1267 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 SUGP1Q8IWZ8 645 aaKnown RBP24.64■■□□□ 1.54
SNF8-216ENST00000573795 FEZF2Q8TBJ5 459 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 MINDY3Q9H8M7 445 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 GJB4Q9NTQ9 266 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 AGPAT5Q9NUQ2 364 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 DNAJB4Q9UDY4 337 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 INPP5FQ9Y2H2 1132 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 IRAK3Q9Y616 596 aa24.64■■□□□ 1.54
SNF8-216ENST00000573795 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.63■■□□□ 1.53
SNF8-216ENST00000573795 C2CD4DB7Z1M9 353 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 WEE2P0C1S8 567 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 CTSAP10619 480 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 SKIP12755 728 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 ITIH3Q06033 890 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 PPP4R3AQ6IN85 833 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 KANK3Q6NY19 840 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 CPLX2Q6PUV4 134 aaKnown RBP24.63■■□□□ 1.53
SNF8-216ENST00000573795 GLB1LQ6UWU2 654 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 AGMOQ6ZNB7 445 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 DDX53Q86TM3 631 aaKnown RBP24.63■■□□□ 1.53
SNF8-216ENST00000573795 C12orf76Q8N812 135 aaPredicted RBP24.63■■□□□ 1.53
SNF8-216ENST00000573795 OXER1Q8TDS5 423 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 HAS1Q92839 578 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 FAM20AQ96MK3 541 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 DHX33Q9H6R0 707 aaKnown RBP24.63■■□□□ 1.53
SNF8-216ENST00000573795 PDRG1Q9NUG6 133 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 COL4A3BPQ9Y5P4 624 aa24.63■■□□□ 1.53
SNF8-216ENST00000573795 MYO15AQ9UKN7 3530 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 EPCAMP16422 314 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 CA8P35219 290 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 SLC11A1P49279 550 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 RAB27AP51159 221 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 AFF1P51825 1210 aaKnown RBP24.62■■□□□ 1.53
SNF8-216ENST00000573795 POLGP54098 1239 aaPredicted RBP24.62■■□□□ 1.53
SNF8-216ENST00000573795 NEK8Q86SG6 692 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 ZNF280BQ86YH2 543 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 SLC22A17Q8WUG5 538 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 NECTIN4Q96NY8 510 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 JPH2Q9BR39 696 aaPredicted RBP24.62■■□□□ 1.53
SNF8-216ENST00000573795 TSHZ2Q9NRE2 1034 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 NR2E1Q9Y466 385 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 CACNA1HO95180 2353 aa24.62■■□□□ 1.53
SNF8-216ENST00000573795 STK36Q9NRP7 1315 aa24.61■■□□□ 1.53
SNF8-216ENST00000573795 PDGFBP01127 241 aaPredicted RBP24.61■■□□□ 1.53
SNF8-216ENST00000573795 PTPN5P54829 565 aa24.61■■□□□ 1.53
SNF8-216ENST00000573795 EARS2Q5JPH6 523 aaKnown RBP24.61■■□□□ 1.53
SNF8-216ENST00000573795 UBXN11Q5T124 520 aa24.61■■□□□ 1.53
SNF8-216ENST00000573795 RARS2Q5T160 578 aaKnown RBP24.61■■□□□ 1.53
SNF8-216ENST00000573795 CES5AQ6NT32 575 aa24.61■■□□□ 1.53
SNF8-216ENST00000573795 PRPF31Q8WWY3 499 aaKnown RBP24.61■■□□□ 1.53
SNF8-216ENST00000573795 TMEM143Q96AN5 459 aa24.61■■□□□ 1.53
SNF8-216ENST00000573795 CEP170P1Q96L14 293 aa24.61■■□□□ 1.53
SNF8-216ENST00000573795 PCDHB2Q9Y5E7 798 aa24.61■■□□□ 1.53
SNF8-216ENST00000573795 CCDC194A0A1B0GVG4 234 aa24.6■■□□□ 1.53
SNF8-216ENST00000573795 DDHD2O94830 711 aa24.6■■□□□ 1.53
SNF8-216ENST00000573795 P4HBP07237 508 aaKnown RBP24.6■■□□□ 1.53
SNF8-216ENST00000573795 HOXA11P31270 313 aaPredicted RBP24.6■■□□□ 1.53
SNF8-216ENST00000573795 SPIRE1Q08AE8 756 aa24.6■■□□□ 1.53
SNF8-216ENST00000573795 MRPL10Q7Z7H8 261 aaKnown RBP24.6■■□□□ 1.53
SNF8-216ENST00000573795 KREMEN2Q8NCW0 462 aa24.6■■□□□ 1.53
SNF8-216ENST00000573795 SLC7A3Q8WY07 619 aa24.6■■□□□ 1.53
SNF8-216ENST00000573795 LXNQ9BS40 222 aa24.6■■□□□ 1.53
SNF8-216ENST00000573795 GBP3Q9H0R5 595 aa24.6■■□□□ 1.53
SNF8-216ENST00000573795 BMP2KQ9NSY1 1161 aaPredicted RBP24.6■■□□□ 1.53
SNF8-216ENST00000573795 DMDP11532 3685 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 FAM205CA6NFA0 338 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 CTDNEP1O95476 244 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 GCFC2P16383 781 aaKnown RBP24.59■■□□□ 1.53
SNF8-216ENST00000573795 MTHFRP42898 656 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 PTPN14Q15678 1187 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 KIAA1841Q6NSI8 718 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 POTEDQ86YR6 584 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 C4orf19Q8IY42 314 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 PRRX2Q99811 253 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 SMOC2Q9H3U7 446 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 DZANK1Q9NVP4 752 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 RGL1Q9NZL6 768 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms