RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 PSMA2P25787 234 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 QARSP47897 775 aaKnown RBP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 BEND6Q5SZJ8 279 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 MOXD1Q6UVY6 613 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 SPATA21Q7Z572 469 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 RCOR2Q8IZ40 523 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 PDZD8Q8NEN9 1154 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 IL17RAQ96F46 866 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 LRRC4Q9HBW1 653 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
PCDHGA9-201ENST00000573521 E7ENQ6 273 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 CES2O00748 559 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 GFPT1Q06210 699 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 ILF2Q12905 390 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 SNX1Q13596 522 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 ITPRIPL1Q6GPH6 555 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 PADI6Q6TGC4 694 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 PI16Q6UXB8 463 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 KIAA0825Q8IV33 1275 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 DNAAF3Q8N9W5 541 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 PPWD1Q96BP3 646 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 TGS1Q96RS0 853 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 MSTO1Q9BUK6 570 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 PARVAQ9NVD7 372 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 NDUFA13Q9P0J0 144 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 FBXL5Q9UKA1 691 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 TNS3Q68CZ2 1445 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 TYW5A2RUC4 315 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 DTNBO60941 627 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 ACSL3O95573 720 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 KRT16P08779 473 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 NFRKBQ6P4R8 1299 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 SETD3Q86TU7 594 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 APBB2Q92870 758 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 CMTM5Q96DZ9 223 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 RNPC3Q96LT9 517 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 CCDC138Q96M89 665 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 CCT8L2Q96SF2 557 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 CYTH2Q99418 400 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 CALN1Q9BXU9 219 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 USP21Q9UK80 565 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 TPX2Q9ULW0 747 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 USP15Q9Y4E8 981 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 SLCO1A2P46721 670 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 C12orf60Q5U649 245 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 XRRA1Q6P2D8 792 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 KDM7AQ6ZMT4 941 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 FAM196AQ6ZSG2 479 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 STOX1Q6ZVD7 989 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 RTKN2Q8IZC4 609 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 AGPAT1Q99943 283 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 SH3GL3Q99963 347 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 UBN1Q9NPG3 1134 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 PLAGL2Q9UPG8 496 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 SLIT1O75093 1534 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 KIF28PB7ZC32 967 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 OSBPP22059 807 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 PEX19P40855 299 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 FNTAP49354 379 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 EFNA5P52803 228 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 PSMC5P62195 406 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 PHEXP78562 749 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 SPDYCQ5MJ68 293 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 COL23A1Q86Y22 540 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 FBXL13Q8NEE6 735 aa13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 ZNF473Q8WTR7 871 aaKnown RBP13.19□□□□□ -0.3
PCDHGA9-201ENST00000573521 TRIM49BA6NDI0 452 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 RGL2O15211 777 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 TOM1L1O75674 476 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 CDC25AP30304 524 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 MRPS35P82673 323 aaKnown RBP13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 MTHFD1LQ6UB35 978 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 TRIML2Q8N7C3 387 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 FAF2Q96CS3 445 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 DNAJC7Q99615 494 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 VGLL3A8MV65 326 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 HSPA4LO95757 839 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 CDC42EP1Q00587 391 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 SF3B3Q15393 1217 aaKnown RBP13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 OR6B2Q6IFH4 312 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 KCNV1Q6PIU1 500 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 GINM1Q9NU53 330 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 HPSEQ9Y251 543 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 TECPR2O15040 1411 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 FTLP02792 175 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 PAPD7Q5XG87 772 aaKnown RBP13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 XPO6Q96QU8 1125 aaKnown RBP13.18□□□□□ -0.3
PCDHGA9-201ENST00000573521 UIMC1Q96RL1 719 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms