RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TDRD10Q5VZ19 366 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 IL27RAQ6UWB1 636 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 RUFY3Q7L099 469 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 HDXQ7Z353 690 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 LURAP1LQ8IV03 231 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 CCDC170Q8IYT3 715 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 NGEFQ8N5V2 710 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 TMCO5AQ8N6Q1 288 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 SPC24Q8NBT2 197 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 GABPB2Q8TAK5 448 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 FBXO30Q8TB52 745 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 ARHGEF2Q92974 986 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 SLC6A18Q96N87 628 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 FAM210AQ96ND0 272 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 GSDMAQ96QA5 445 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 CGRRF1Q99675 332 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 ZFYVE21Q9BQ24 234 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 AGXT2Q9BYV1 514 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 KCTD10Q9H3F6 313 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 FANCFQ9NPI8 374 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 WHRNQ9P202 907 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 ADD3Q9UEY8 706 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 SUN2Q9UH99 717 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 EIF2B4Q9UI10 523 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 RPS6KA6Q9UK32 745 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 KIF3AQ9Y496 699 aa5.57□□□□□ -1.52
TOPBP1-210ENST00000572787 PIK3R4Q99570 1358 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 LGALS16A8MUM7 142 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 RNF223E7ERA6 249 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 TNFRSF10AO00220 468 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 NFKBIEO00221 500 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 PDE2AO00408 941 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 CASQ2O14958 399 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 RRP9O43818 475 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 SLC22A3O75751 556 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 TRPA1O75762 1119 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 BBOX1O75936 387 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 QDPRP09417 244 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 PAMP19021 973 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 HLA-DPA1P20036 260 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 EEF1GP26641 437 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 SOX18P35713 384 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 STAT5AP42229 794 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 CDK8P49336 464 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 MCM2P49736 904 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 POLR2FP61218 127 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 RBP5P82980 135 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 ACVR2BQ13705 512 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 DAG1Q14118 895 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 PPA1Q15181 289 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 WSCD2Q2TBF2 565 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 VWA3BQ502W6 1294 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 SLC35F1Q5T1Q4 408 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 RAB12Q6IQ22 244 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 ADAMTSL4Q6UY14 1074 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 C2CD5Q86YS7 1000 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 LIX1LQ8IVB5 337 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 TMEM192Q8IY95 271 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 RNF152Q8N8N0 203 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 ZNF610Q8N9Z0 462 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 KDF1Q8NAX2 398 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 TMEM145Q8NBT3 493 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 ZNF540Q8NDQ6 660 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 GDAP1Q8TB36 358 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 ITFG2Q969R8 447 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 MUL1Q969V5 352 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 ZUFSPQ96AP4 578 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 COA7Q96BR5 231 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 FEM1CQ96JP0 617 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 PDCD2LQ9BRP1 358 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 HGH1Q9BTY7 390 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 PAIP1Q9H074 479 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 RMI1Q9H9A7 625 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 H2AFY2Q9P0M6 372 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 SERPINB13Q9UIV8 391 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 ADAM30Q9UKF2 790 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 PCDHA4Q9UN74 947 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 ARHGAP26Q9UNA1 814 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 SRPK3Q9UPE1 567 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 TMEM5Q9Y2B1 443 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 COQ6Q9Y2Z9 468 aa5.56□□□□□ -1.52
TOPBP1-210ENST00000572787 hCG_1807616A0A1W2PRN6 198 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 SPDYE3A6NKU9 549 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 CHURC1-FNTBB4DL54 471 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 CAPN9O14815 690 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 HNRNPDLO14979 420 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 TLL1O43897 1013 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 TSPAN9O75954 239 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ENDOD1O94919 500 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 SCGB1D1O95968 90 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ALDH1A1P00352 501 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 CKMP06732 381 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 SNRPB2P08579 225 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 NR2F1P10589 423 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 TNNT1P13805 278 aa5.55□□□□□ -1.52
TOPBP1-210ENST00000572787 ENPP1P22413 925 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms