RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 ZSCAN32Q9NX65 697 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 LAMA1P25391 3075 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 NOTCH4Q99466 2003 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 ASPMQ8IZT6 3477 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 POTEMA6NI47 508 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 DHX15O43143 795 aaKnown RBP11.48□□□□□ -0.57
CHMP6-203ENST00000572525 CYP21A2P08686 494 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 LAMP2P13473 410 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 SREBF1P36956 1147 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 GPC3P51654 580 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 AP3B2Q13367 1082 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 HTR4Q13639 388 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 UBE2SQ16763 222 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 NOMO2Q5JPE7 1267 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 SPECC1Q5M775 1068 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 ZNF746Q6NUN9 644 aaPredicted RBP11.48□□□□□ -0.57
CHMP6-203ENST00000572525 PPP1R18Q6NYC8 613 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 POTEGQ6S5H5 508 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 GLB1LQ6UWU2 654 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 TMTC2Q8N394 836 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 METTL13Q8N6R0 699 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 FEZF2Q8TBJ5 459 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 BCL7CQ8WUZ0 217 aaPredicted RBP11.48□□□□□ -0.57
CHMP6-203ENST00000572525 RSAD2Q8WXG1 361 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 PIBF1Q8WXW3 757 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 MYADMQ96S97 322 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 TMEM175Q9BSA9 504 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 GLT8D2Q9H1C3 349 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 PLEKHA4Q9H4M7 779 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 MAN1C1Q9NR34 630 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 MRPL17Q9NRX2 175 aaKnown RBP11.48□□□□□ -0.57
CHMP6-203ENST00000572525 ZDHHC7Q9NXF8 308 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 SMG5Q9UPR3 1016 aaKnown RBP11.48□□□□□ -0.57
CHMP6-203ENST00000572525 AKT3Q9Y243 479 aa11.48□□□□□ -0.57
CHMP6-203ENST00000572525 CCDC195A0A1B0GUA6 201 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 KANSL1LA0AUZ9 987 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 hCG_1984214I3L0E3 225 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 SLC30A4O14863 429 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 INPPL1O15357 1258 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 SOD2P04179 222 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 CALM1P0DP23 149 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 CALM2P0DP24 149 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 CALM3P0DP25 149 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 CLCN3P51790 818 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 EFCAB12Q6NXP0 572 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 RNF168Q8IYW5 571 aaPredicted RBP11.47□□□□□ -0.57
CHMP6-203ENST00000572525 SRBD1Q8N5C6 995 aaKnown RBP11.47□□□□□ -0.57
CHMP6-203ENST00000572525 ZNF713Q8N859 430 aaPredicted RBP11.47□□□□□ -0.57
CHMP6-203ENST00000572525 RNF169Q8NCN4 708 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 NETO1Q8TDF5 533 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 ATRIPQ8WXE1 791 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 RPS6KC1Q96S38 1066 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 ANO3Q9BYT9 981 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 RXFP1Q9HBX9 757 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 TBC1D22BQ9NU19 505 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 KANSL3Q9P2N6 904 aa11.47□□□□□ -0.57
CHMP6-203ENST00000572525 DSPP15924 2871 aaKnown RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 SPEGQ15772 3267 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 CNTNAP2Q9UHC6 1331 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 FOXD2O60548 495 aaPredicted RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 EFEMP2O95967 443 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 GLUD1P00367 558 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 URODP06132 367 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 RPS9P46781 194 aaKnown RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 SLC11A1P49279 550 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 ANTXR2P58335 489 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 SETQ01105 290 aaPredicted RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 RNASELQ05823 741 aaKnown RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 SWSAP1Q6NVH7 229 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 MAMSTRQ6ZN01 415 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 PLEKHM2Q8IWE5 1019 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 MB21D2Q8IYB1 491 aaPredicted RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 DDX1Q92499 740 aaKnown RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 SMG7Q92540 1137 aaKnown RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 ZNF707Q96C28 371 aaPredicted RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 PPP1R16BQ96T49 567 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 NELL2Q99435 816 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 HERC2P3Q9BVR0 1158 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 FOXQ1Q9C009 403 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 INO80BQ9C086 356 aaPredicted RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 RIC8AQ9NPQ8 531 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 PRMT8Q9NR22 394 aaPredicted RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 SPATA6Q9NWH7 488 aaPredicted RBP11.46□□□□□ -0.57
CHMP6-203ENST00000572525 PCDHA10Q9Y5I2 948 aa11.46□□□□□ -0.57
CHMP6-203ENST00000572525 PDCD11Q14690 1871 aaKnown RBP11.46□□□□□ -0.58
CHMP6-203ENST00000572525 IGF2RP11717 2491 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 NBEAQ8NFP9 2946 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 E7EWF7 191 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 IPO5O00410 1097 aaKnown RBP11.45□□□□□ -0.58
CHMP6-203ENST00000572525 OFD1O75665 1012 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 PLEKHA8P1O95397 391 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 PSAPP07602 524 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 CYP3A4P08684 503 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 SFPQP23246 707 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHMP6-203ENST00000572525 PFKPQ01813 784 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 MLF2Q15773 248 aaPredicted RBP11.45□□□□□ -0.58
CHMP6-203ENST00000572525 SMC5Q8IY18 1101 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 CKAP2LQ8IYA6 745 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 CRYGNQ8WXF5 182 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 CLDN23Q96B33 292 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms