RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 DCAF17Q5H9S7 520 aaPredicted RBP18.11■□□□□ 0.49
LITAF-209ENST00000571688 TRMT10CQ7L0Y3 403 aaKnown RBP18.11■□□□□ 0.49
LITAF-209ENST00000571688 SLC44A5Q8NCS7 719 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 STK32AQ8WU08 396 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 SYT11Q9BT88 431 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 LRMDAQ9H2I8 198 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 CYP39A1Q9NYL5 469 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 ASB3Q9Y575 518 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 SPDYE5A6NIY4 337 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 hCG_1984214I3L0E3 225 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 RASA1P20936 1047 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 ABCB4P21439 1286 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 TUBP50607 506 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 ZDHHC14Q8IZN3 488 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 ZNF713Q8N859 430 aaPredicted RBP18.11■□□□□ 0.49
LITAF-209ENST00000571688 ANKRD42Q8N9B4 389 aa18.11■□□□□ 0.49
LITAF-209ENST00000571688 TGS1Q96RS0 853 aaKnown RBP18.11■□□□□ 0.49
LITAF-209ENST00000571688 NAV1Q8NEY1 1877 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 ANKRD63C9JTQ0 380 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 SMIM24O75264 130 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 AKAP3O75969 853 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 ATP5DP30049 168 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 ADCY7P51828 1080 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 RAD23BP54727 409 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 MTFR1Q15390 333 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 CNBD1Q8NA66 436 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 PIGOQ8TEQ8 1089 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 SLC35C1Q96A29 364 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 MLXIPLQ9NP71 852 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 USP40Q9NVE5 1235 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 BSDC1Q9NW68 430 aaPredicted RBP18.1■□□□□ 0.49
LITAF-209ENST00000571688 MINPP1Q9UNW1 487 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 PITPNM2Q9BZ72 1349 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 GTPBP10A4D1E9 387 aaKnown RBP18.1■□□□□ 0.49
LITAF-209ENST00000571688 GH1P01241 217 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 KLRK1P26718 216 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 SNX1Q13596 522 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 MPP2Q14168 576 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 RRP1BQ14684 758 aaKnown RBP18.1■□□□□ 0.49
LITAF-209ENST00000571688 GNPTABQ3T906 1256 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 CCDC137Q6PK04 289 aaKnown RBP18.1■□□□□ 0.49
LITAF-209ENST00000571688 CYFIP1Q7L576 1253 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 ENDOVQ8N8Q3 282 aaKnown RBP18.1■□□□□ 0.49
LITAF-209ENST00000571688 GDAP1Q8TB36 358 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 TAOK3Q9H2K8 898 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 CDC42EP4Q9H3Q1 356 aaKnown RBP18.1■□□□□ 0.49
LITAF-209ENST00000571688 CTNNAL1Q9UBT7 734 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 COG5Q9UP83 839 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 KIAA1024Q9UPX6 916 aa18.1■□□□□ 0.49
LITAF-209ENST00000571688 MAP3K13O43283 966 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 ATP5HO75947 161 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 HOXD13P35453 343 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 SOX5P35711 763 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 GCLCP48506 637 aaPredicted RBP18.09■□□□□ 0.49
LITAF-209ENST00000571688 MXRA7P84157 204 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 KNOP1Q1ED39 458 aaKnown RBP18.09■□□□□ 0.49
LITAF-209ENST00000571688 AGGF1Q8N302 714 aaeCLIP18.09■□□□□ 0.49
LITAF-209ENST00000571688 GALNT15Q8N3T1 639 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 SLC17A8Q8NDX2 589 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 ZFAND2BQ8WV99 257 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 GJA10Q969M2 543 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 GRAMD1AQ96CP6 724 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 MAGEB18Q96M61 343 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 SYT15Q9BQS2 421 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 RTN3O95197 1032 aaPredicted RBP18.09■□□□□ 0.49
LITAF-209ENST00000571688 ACADSP16219 412 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 PCK1P35558 622 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 PEX5P50542 639 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 SLC5A9Q2M3M2 681 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 ARSHQ5FYA8 562 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 TCERG1LQ5VWI1 586 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 TEKT4Q8WW24 435 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 DDX23Q9BUQ8 820 aaKnown RBP18.09■□□□□ 0.49
LITAF-209ENST00000571688 MXD3Q9BW11 206 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 RIOX1Q9H6W3 641 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 METTL14Q9HCE5 456 aaKnown RBP18.09■□□□□ 0.49
LITAF-209ENST00000571688 KCNK9Q9NPC2 374 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 DDX25Q9UHL0 483 aaKnown RBP18.09■□□□□ 0.49
LITAF-209ENST00000571688 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
LITAF-209ENST00000571688 GGPS1O95749 300 aa18.08■□□□□ 0.49
LITAF-209ENST00000571688 TTLL1O95922 423 aa18.08■□□□□ 0.49
LITAF-209ENST00000571688 GM2AP17900 193 aa18.08■□□□□ 0.49
LITAF-209ENST00000571688 HADHBP55084 474 aaKnown RBP18.08■□□□□ 0.49
LITAF-209ENST00000571688 CYP1B1Q16678 543 aa18.08■□□□□ 0.49
LITAF-209ENST00000571688 ASAP3Q8TDY4 903 aa18.08■□□□□ 0.49
LITAF-209ENST00000571688 SNED1Q8TER0 1413 aa18.08■□□□□ 0.49
LITAF-209ENST00000571688 TMEM237Q96Q45 408 aa18.08■□□□□ 0.49
LITAF-209ENST00000571688 THAP2Q9H0W7 228 aa18.08■□□□□ 0.49
LITAF-209ENST00000571688 ALG6Q9Y672 507 aa18.08■□□□□ 0.49
LITAF-209ENST00000571688 POTEB3A0JP26 581 aa18.08■□□□□ 0.48
LITAF-209ENST00000571688 MIF4GDA9UHW6 222 aaKnown RBP18.08■□□□□ 0.48
LITAF-209ENST00000571688 POTECB2RU33 542 aa18.08■□□□□ 0.48
LITAF-209ENST00000571688 PDXKO00764 312 aa18.08■□□□□ 0.48
LITAF-209ENST00000571688 HGSO14964 777 aaPredicted RBP18.08■□□□□ 0.48
LITAF-209ENST00000571688 EYA4O95677 639 aa18.08■□□□□ 0.48
LITAF-209ENST00000571688 CNGA1P29973 690 aa18.08■□□□□ 0.48
LITAF-209ENST00000571688 POTEBQ6S5H4 581 aa18.08■□□□□ 0.48
LITAF-209ENST00000571688 EPM2AIP1Q7L775 607 aaPredicted RBP18.08■□□□□ 0.48
LITAF-209ENST00000571688 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.08■□□□□ 0.48
LITAF-209ENST00000571688 FAM13CQ8NE31 585 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms