RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 DEPTORQ8TB45 409 aa21.23■□□□□ 0.99
RPAIN-210ENST00000571613 PRIMPOLQ96LW4 560 aa21.23■□□□□ 0.99
RPAIN-210ENST00000571613 FBXL5Q9UKA1 691 aa21.23■□□□□ 0.99
RPAIN-210ENST00000571613 PAXBP1Q9Y5B6 917 aa21.23■□□□□ 0.99
RPAIN-210ENST00000571613 P4HA2O15460 535 aa21.22■□□□□ 0.99
RPAIN-210ENST00000571613 PPFIA4O75335 1185 aa21.22■□□□□ 0.99
RPAIN-210ENST00000571613 CETN1Q12798 172 aa21.22■□□□□ 0.99
RPAIN-210ENST00000571613 MXD4Q14582 209 aaPredicted RBP21.22■□□□□ 0.99
RPAIN-210ENST00000571613 DUSP28Q4G0W2 176 aa21.22■□□□□ 0.99
RPAIN-210ENST00000571613 COPS5Q92905 334 aa21.22■□□□□ 0.99
RPAIN-210ENST00000571613 TMEM134Q9H6X4 195 aa21.22■□□□□ 0.99
RPAIN-210ENST00000571613 MYO6Q9UM54 1294 aa21.22■□□□□ 0.99
RPAIN-210ENST00000571613 ADGRG1Q9Y653 693 aa21.22■□□□□ 0.99
RPAIN-210ENST00000571613 EPN1Q9Y6I3 576 aaPredicted RBP21.22■□□□□ 0.99
RPAIN-210ENST00000571613 MCM3APO60318 1980 aa21.22■□□□□ 0.99
RPAIN-210ENST00000571613 IPO7O95373 1038 aaKnown RBP21.21■□□□□ 0.99
RPAIN-210ENST00000571613 GLRA2P23416 452 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 SOX10P56693 466 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 MCCD1P59942 119 aaPredicted RBP21.21■□□□□ 0.99
RPAIN-210ENST00000571613 ZNF484Q5JVG2 852 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 TOGARAM2Q6ZUX3 1019 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 REXO1L1PQ8IX06 675 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 SOCS4Q8WXH5 440 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 TMEM143Q96AN5 459 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 KIAA1586Q9HCI6 787 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 TM4SF4P48230 202 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 EFNA5P52803 228 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 KRT83P78385 493 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 WDR59Q6PJI9 974 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 FMNL3Q8IVF7 1028 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 CCDC155Q8N6L0 562 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 PSPC1Q8WXF1 523 aaKnown RBP21.21■□□□□ 0.99
RPAIN-210ENST00000571613 CBWD1Q9BRT8 395 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 IKZF4Q9H2S9 585 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 ZNF215Q9UL58 517 aaPredicted RBP21.21■□□□□ 0.99
RPAIN-210ENST00000571613 ABT1Q9ULW3 272 aaKnown RBP21.21■□□□□ 0.99
RPAIN-210ENST00000571613 TRPC6Q9Y210 931 aa21.21■□□□□ 0.99
RPAIN-210ENST00000571613 IGKV6-21A0A0C4DH24 114 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 TMEM88BA6NKF7 163 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 FAM155AB1AL88 458 aaPredicted RBP21.2■□□□□ 0.98
RPAIN-210ENST00000571613 K7ERI5 159 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 HNRNPDLO14979 420 aaKnown RBP21.2■□□□□ 0.98
RPAIN-210ENST00000571613 NDUFA10O95299 355 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 PIGRP01833 764 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 MARK3P27448 753 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 ADCYAP1R1P41586 468 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 FMO5P49326 533 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 SLFN12LQ6IEE8 588 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 PDXDC1Q6P996 788 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 RRAGAQ7L523 313 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 KIF18AQ8NI77 898 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 NPLOC4Q8TAT6 608 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 BAP1Q92560 729 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 BICD1Q96G01 975 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 KIFC3Q9BVG8 833 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 PCIF1Q9H4Z3 704 aa21.2■□□□□ 0.98
RPAIN-210ENST00000571613 LRRIQ4A6NIV6 560 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 PMM2O15305 246 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 ASAP2O43150 1006 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 ALDH1A1P00352 501 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 LGALS2P05162 132 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 PON1P27169 355 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 RGS2P41220 211 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 VAMP7P51809 220 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 ASAP3Q8TDY4 903 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 CHP1Q99653 195 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 CRACR2AQ9BSW2 395 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 C2orf40Q9H1Z8 148 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 ADGRA3Q8IWK6 1321 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 COL1A2P08123 1366 aa21.19■□□□□ 0.98
RPAIN-210ENST00000571613 MAGEB2O15479 319 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 ADCY3O60266 1144 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 NOL4O94818 638 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 LIG4P49917 911 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 POLR2FP61218 127 aaKnown RBP21.18■□□□□ 0.98
RPAIN-210ENST00000571613 MTF1Q14872 753 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 OLFML2BQ68BL8 750 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 TRIM50Q86XT4 487 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 POMGNT1Q8WZA1 660 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 CCDC42Q96M95 316 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 FBXL18Q96ME1 805 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 GCNT4Q9P109 453 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 ZHX1Q9UKY1 873 aaPredicted RBP21.18■□□□□ 0.98
RPAIN-210ENST00000571613 LRRC53A6NM62 1247 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 EPHB6O15197 1021 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 HOXD8P13378 290 aaPredicted RBP21.18■□□□□ 0.98
RPAIN-210ENST00000571613 RFX1P22670 979 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 ETF1P62495 437 aaKnown RBP21.18■□□□□ 0.98
RPAIN-210ENST00000571613 TFDP1Q14186 410 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 KLHDC7AQ5VTJ3 777 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 SFMBT2Q5VUG0 894 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 ZBTB8OSQ8IWT0 167 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 RDH13Q8NBN7 331 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 AFG1LQ8WV93 481 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 USP6NLQ92738 828 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 VTI1AQ96AJ9 217 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 GANQ9H2C0 597 aa21.18■□□□□ 0.98
RPAIN-210ENST00000571613 NHEJ1Q9H9Q4 299 aaPredicted RBP21.18■□□□□ 0.98
RPAIN-210ENST00000571613 R3HCC1Q9Y3T6 440 aaKnown RBP21.18■□□□□ 0.98
RPAIN-210ENST00000571613 STYXL1Q9Y6J8 313 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms