RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 PPFIA1Q13136 1202 aa23.97■■□□□ 1.43
UBFD1-210ENST00000571064 SPECC1Q5M775 1068 aa23.97■■□□□ 1.43
UBFD1-210ENST00000571064 TSHZ1Q6ZSZ6 1077 aa23.97■■□□□ 1.43
UBFD1-210ENST00000571064 USP49Q70CQ1 688 aa23.97■■□□□ 1.43
UBFD1-210ENST00000571064 TRMT1LQ7Z2T5 733 aaKnown RBP23.97■■□□□ 1.43
UBFD1-210ENST00000571064 TPH2Q8IWU9 490 aa23.97■■□□□ 1.43
UBFD1-210ENST00000571064 TNPO1Q92973 898 aaKnown RBP23.97■■□□□ 1.43
UBFD1-210ENST00000571064 RAB34Q9BZG1 259 aa23.97■■□□□ 1.43
UBFD1-210ENST00000571064 TUFT1Q9NNX1 390 aa23.97■■□□□ 1.43
UBFD1-210ENST00000571064 TUBE1Q9UJT0 475 aa23.97■■□□□ 1.43
UBFD1-210ENST00000571064 ZFHX2Q9C0A1 2572 aaPredicted RBP23.96■■□□□ 1.43
UBFD1-210ENST00000571064 ZBTB42B2RXF5 422 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 INSRRP14616 1297 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 RPA1P27694 616 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 GATMP50440 423 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 GRIK4Q16099 956 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 AXDND1Q5T1B0 1012 aaPredicted RBP23.96■■□□□ 1.43
UBFD1-210ENST00000571064 C4orf19Q8IY42 314 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 CKAP2LQ8IYA6 745 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 SNX29Q8TEQ0 813 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 ZBTB10Q96DT7 871 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 AK8Q96MA6 479 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 ZSWIM4Q9H7M6 989 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 TLE6Q9H808 572 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 GDPD2Q9HCC8 539 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 PCDHA7Q9UN72 937 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 TRPC6Q9Y210 931 aa23.96■■□□□ 1.43
UBFD1-210ENST00000571064 PER2O15055 1255 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 HBP1O60381 514 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 LYPLA2O95372 231 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 CCT6AP40227 531 aaKnown RBP23.95■■□□□ 1.42
UBFD1-210ENST00000571064 MARCH8Q5T0T0 291 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 ANO5Q75V66 913 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 NPAS4Q8IUM7 802 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 ERMNQ8TAM6 284 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 KCNG4Q8TDN1 519 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 TRAPPC12Q8WVT3 735 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 BBXQ8WY36 941 aaPredicted RBP23.95■■□□□ 1.42
UBFD1-210ENST00000571064 EPSTI1Q96J88 318 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 PNMA5Q96PV4 448 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 CACNA1HO95180 2353 aa23.95■■□□□ 1.42
UBFD1-210ENST00000571064 MBLAC1A4D2B0 266 aaPredicted RBP23.94■■□□□ 1.42
UBFD1-210ENST00000571064 H0Y858 1186 aa23.94■■□□□ 1.42
UBFD1-210ENST00000571064 MRPS6P82932 125 aaKnown RBP23.94■■□□□ 1.42
UBFD1-210ENST00000571064 XKR3Q5GH77 459 aa23.94■■□□□ 1.42
UBFD1-210ENST00000571064 KRT79Q5XKE5 535 aa23.94■■□□□ 1.42
UBFD1-210ENST00000571064 POTEGQ6S5H5 508 aa23.94■■□□□ 1.42
UBFD1-210ENST00000571064 ZNF579Q8NAF0 562 aaKnown RBP23.94■■□□□ 1.42
UBFD1-210ENST00000571064 VN1R2Q8NFZ6 395 aa23.94■■□□□ 1.42
UBFD1-210ENST00000571064 FAM167AQ96KS9 214 aa23.94■■□□□ 1.42
UBFD1-210ENST00000571064 SPATA32Q96LK8 384 aa23.94■■□□□ 1.42
UBFD1-210ENST00000571064 CEP89Q96ST8 783 aa23.94■■□□□ 1.42
UBFD1-210ENST00000571064 NIFKQ9BYG3 293 aaKnown RBP23.94■■□□□ 1.42
UBFD1-210ENST00000571064 TLR9Q9NR96 1032 aa23.94■■□□□ 1.42
UBFD1-210ENST00000571064 DDX11L8A8MPP1 907 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 CUTAO60888 179 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 IGBP1P78318 339 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 TARBP2Q15633 366 aaKnown RBP23.93■■□□□ 1.42
UBFD1-210ENST00000571064 HAUS3Q68CZ6 603 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 PLA2G4FQ68DD2 849 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 CABP7Q86V35 215 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 MICAL1Q8TDZ2 1067 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 SUSD6Q92537 303 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 SH2D3AQ9BRG2 576 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 SCAND2PQ9GZW5 306 aaPredicted RBP23.93■■□□□ 1.42
UBFD1-210ENST00000571064 FAM49AQ9H0Q0 323 aaPredicted RBP23.93■■□□□ 1.42
UBFD1-210ENST00000571064 NRBP2Q9NSY0 501 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 SEPT9Q9UHD8 586 aaPredicted RBP23.93■■□□□ 1.42
UBFD1-210ENST00000571064 PLXNA4Q9HCM2 1894 aa23.93■■□□□ 1.42
UBFD1-210ENST00000571064 DKC1O60832 514 aaKnown RBP eCLIP23.92■■□□□ 1.42
UBFD1-210ENST00000571064 PDGFBP01127 241 aaPredicted RBP23.92■■□□□ 1.42
UBFD1-210ENST00000571064 ATF7P17544 494 aaPredicted RBP23.92■■□□□ 1.42
UBFD1-210ENST00000571064 IBSPP21815 317 aaPredicted RBP23.92■■□□□ 1.42
UBFD1-210ENST00000571064 YWHABP31946 246 aaKnown RBP23.92■■□□□ 1.42
UBFD1-210ENST00000571064 ME1P48163 572 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 PTPN21Q16825 1174 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 ZNF484Q5JVG2 852 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 HYIQ5T013 277 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 SHC4Q6S5L8 630 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 KCNK18Q7Z418 384 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 PIGOQ8TEQ8 1089 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 LRRC15Q8TF66 581 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 IRF2BPLQ9H1B7 796 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 KIAA1024Q9UPX6 916 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 STK24Q9Y6E0 443 aa23.92■■□□□ 1.42
UBFD1-210ENST00000571064 ARID2Q68CP9 1835 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 STAG3L1P0CL83 205 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 UBA7P41226 1012 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 NPEPPSP55786 919 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 TMEM62Q0P6H9 643 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 PLIN2Q99541 437 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 FTHL17Q9BXU8 183 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 CCSER1Q9C0I3 900 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 DDX19AQ9NUU7 478 aaKnown RBP23.91■■□□□ 1.42
UBFD1-210ENST00000571064 PADI3Q9ULW8 664 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 PLXNA3P51805 1871 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 COL1A2P08123 1366 aa23.91■■□□□ 1.42
UBFD1-210ENST00000571064 RRN3P2A6NIE6 340 aa23.9■■□□□ 1.42
UBFD1-210ENST00000571064 MUTP22033 750 aa23.9■■□□□ 1.42
UBFD1-210ENST00000571064 KARSQ15046 597 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms