RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 BMP15O95972 392 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 CDC25AP30304 524 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 GATMP50440 423 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 DNM1Q05193 864 aaKnown RBP14.85□□□□□ -0.03
CCDC40-205ENST00000571028 SPIRE1Q08AE8 756 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 IL17AQ16552 155 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 TPRNQ4KMQ1 711 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 PLPP4Q5VZY2 271 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 ANKRD54Q6NXT1 300 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 B3GNT9Q6UX72 402 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 PLPPR4Q7Z2D5 763 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 TMEM105Q8N8V8 129 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 VN1R2Q8NFZ6 395 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 RDM1Q8NG50 284 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 TRAPPC12Q8WVT3 735 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 ZBTB10Q96DT7 871 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 SH2D3AQ9BRG2 576 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 ENTPD7Q9NQZ7 604 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 PADI3Q9ULW8 664 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 TRPV2Q9Y5S1 764 aa14.85□□□□□ -0.03
CCDC40-205ENST00000571028 TMEM150BA6NC51 233 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 RRN3P2A6NIE6 340 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 TBKBP1A7MCY6 615 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 LAD1O00515 517 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 ZNF862O60290 1169 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 P4HBP07237 508 aaKnown RBP14.84□□□□□ -0.03
CCDC40-205ENST00000571028 INSRRP14616 1297 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 HOXB8P17481 243 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-205ENST00000571028 ATP4AP20648 1035 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 PRPHP41219 470 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 PSMC5P62195 406 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 NUCB2P80303 420 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 PRKCEQ02156 737 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 TMEM62Q0P6H9 643 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 PTPAQ15257 358 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 ASTLQ6HA08 431 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-205ENST00000571028 CES5AQ6NT32 575 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 ERMNQ8TAM6 284 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 TNPO1Q92973 898 aaKnown RBP14.84□□□□□ -0.03
CCDC40-205ENST00000571028 RAB34Q9BZG1 259 aa14.84□□□□□ -0.03
CCDC40-205ENST00000571028 SEPT9Q9UHD8 586 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-205ENST00000571028 PUF60Q9UHX1 559 aaKnown RBP14.84□□□□□ -0.03
CCDC40-205ENST00000571028 MAFBQ9Y5Q3 323 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-205ENST00000571028 MYO15AQ9UKN7 3530 aa14.83□□□□□ -0.03
CCDC40-205ENST00000571028 DENND3A2RUS2 1198 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 MBLAC1A4D2B0 266 aaPredicted RBP14.83□□□□□ -0.04
CCDC40-205ENST00000571028 OATP04181 439 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 CCT6AP40227 531 aaKnown RBP14.83□□□□□ -0.04
CCDC40-205ENST00000571028 QARSP47897 775 aaKnown RBP14.83□□□□□ -0.04
CCDC40-205ENST00000571028 FXR2P51116 673 aaKnown RBP eCLIP14.83□□□□□ -0.04
CCDC40-205ENST00000571028 GRIN1Q05586 938 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 RTN4RL1Q86UN2 441 aaPredicted RBP14.83□□□□□ -0.04
CCDC40-205ENST00000571028 SNX29Q8TEQ0 813 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 NECTIN4Q96NY8 510 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 IPO9Q96P70 1041 aaKnown RBP14.83□□□□□ -0.04
CCDC40-205ENST00000571028 PLIN2Q99541 437 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 TCF25Q9BQ70 676 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 LXNQ9BS40 222 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 S1PR5Q9H228 398 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 NRBP2Q9NSY0 501 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 WRAP73Q9P2S5 460 aaPredicted RBP14.83□□□□□ -0.04
CCDC40-205ENST00000571028 IGSF9BQ9UPX0 1349 aa14.83□□□□□ -0.04
CCDC40-205ENST00000571028 SPTBN4Q9H254 2564 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 PTPRZ1P23471 2315 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-205ENST00000571028 ZBTB39O15060 712 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 HBP1O60381 514 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 MED24O75448 989 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 SLITRK3O94933 977 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 DDIT3P35638 169 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 SARSP49591 514 aaKnown RBP14.82□□□□□ -0.04
CCDC40-205ENST00000571028 SLC26A2P50443 739 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 ERVFC1P60507 584 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 NFX1Q12986 1120 aaKnown RBP14.82□□□□□ -0.04
CCDC40-205ENST00000571028 SLC39A14Q15043 492 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 MTERF2Q49AM1 385 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 SPECC1Q5M775 1068 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 ARL6IP4Q66PJ3 421 aaKnown RBP14.82□□□□□ -0.04
CCDC40-205ENST00000571028 PLA2G4FQ68DD2 849 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 TMEM184AQ6ZMB5 413 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 CRIPAKQ8N1N5 446 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 BBXQ8WY36 941 aaPredicted RBP14.82□□□□□ -0.04
CCDC40-205ENST00000571028 CASP10Q92851 521 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 CLIC6Q96NY7 704 aa14.82□□□□□ -0.04
CCDC40-205ENST00000571028 PLXNA3P51805 1871 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 C2CD4DB7Z1M9 353 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 SPTLC2O15270 562 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 DKC1O60832 514 aaKnown RBP eCLIP14.81□□□□□ -0.04
CCDC40-205ENST00000571028 LAG3P18627 525 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 NPEPPSP55786 919 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 XKR3Q5GH77 459 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 MARCH8Q5T0T0 291 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 KRT79Q5XKE5 535 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 CATSPER3Q86XQ3 398 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 TDRD5Q8NAT2 981 aaKnown RBP14.81□□□□□ -0.04
CCDC40-205ENST00000571028 COLGALT1Q8NBJ5 622 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 LINC00301Q8NCQ3 95 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 FLCNQ8NFG4 579 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 RASSF8Q8NHQ8 419 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 KCNG4Q8TDN1 519 aa14.81□□□□□ -0.04
CCDC40-205ENST00000571028 PIGOQ8TEQ8 1089 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms