RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 SKIP12755 728 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 ATF7P17544 494 aaPredicted RBP12.36□□□□□ -0.43
SMG6-206ENST00000570668 RAB27AP51159 221 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 GPM6BQ13491 265 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 SF3A1Q15459 793 aaKnown RBP12.36□□□□□ -0.43
SMG6-206ENST00000570668 CCDC85BQ15834 202 aaPredicted RBP12.36□□□□□ -0.43
SMG6-206ENST00000570668 HYIQ5T013 277 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
SMG6-206ENST00000570668 MAEAQ7L5Y9 396 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMG6-206ENST00000570668 PPM1EQ8WY54 764 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 P2RX5Q93086 422 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 AK8Q96MA6 479 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 C11orf84Q9BUA3 381 aaPredicted RBP12.36□□□□□ -0.43
SMG6-206ENST00000570668 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
SMG6-206ENST00000570668 FAM105AQ9NUU6 356 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 E9PMD0 336 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 SLC26A4O43511 780 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 TSPAN1O60635 241 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 AXLP30530 894 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 MBTD1Q05BQ5 628 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 PTPROQ16827 1216 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 NAALADL2Q58DX5 795 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 ABI1Q8IZP0 508 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 MICALL1Q8N3F8 863 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 MRPL38Q96DV4 380 aaKnown RBP12.35□□□□□ -0.43
SMG6-206ENST00000570668 CASD1Q96PB1 797 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 LMAN2LQ9H0V9 348 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 ZSCAN16Q9H4T2 348 aaPredicted RBP12.35□□□□□ -0.43
SMG6-206ENST00000570668 TYW1Q9NV66 732 aaKnown RBP12.35□□□□□ -0.43
SMG6-206ENST00000570668 BRWD1Q9NSI6 2320 aa12.35□□□□□ -0.43
SMG6-206ENST00000570668 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
SMG6-206ENST00000570668 GRM6O15303 877 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 ERLIN2O94905 339 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 PDIA4P13667 645 aaKnown RBP12.34□□□□□ -0.43
SMG6-206ENST00000570668 LONP1P36776 959 aaKnown RBP12.34□□□□□ -0.43
SMG6-206ENST00000570668 NCBP1Q09161 790 aaKnown RBP12.34□□□□□ -0.43
SMG6-206ENST00000570668 PTPAQ15257 358 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 AMHR2Q16671 573 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 UBXN11Q5T124 520 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 CDCA2Q69YH5 1023 aaPredicted RBP12.34□□□□□ -0.43
SMG6-206ENST00000570668 FAM173BQ6P4H8 233 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 KCNK18Q7Z418 384 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 MRPL10Q7Z7H8 261 aaKnown RBP12.34□□□□□ -0.43
SMG6-206ENST00000570668 RNF169Q8NCN4 708 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 BSNDQ8WZ55 320 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 KIFAP3Q92845 792 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 CCDC51Q96ER9 411 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 PNMA5Q96PV4 448 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 NT5C3AQ9H0P0 336 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 PLAGL2Q9UPG8 496 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 PCDHB2Q9Y5E7 798 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 CLIC4Q9Y696 253 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 KIAA1671Q9BY89 1806 aa12.34□□□□□ -0.43
SMG6-206ENST00000570668 LRRIQ4A6NIV6 560 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 ARF4P18085 180 aaPredicted RBP12.33□□□□□ -0.44
SMG6-206ENST00000570668 UBA7P41226 1012 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 NAMPTP43490 491 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 GRIN1Q05586 938 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 PPP2R5AQ15172 486 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 ZRSR1Q15695 479 aaKnown RBP12.33□□□□□ -0.44
SMG6-206ENST00000570668 FAM187BQ17R55 369 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 TMEM119Q4V9L6 283 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 RINT1Q6NUQ1 792 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 NOTUMQ6P988 496 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 LRRC55Q6ZSA7 311 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 C1orf186Q6ZWK4 172 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 CABP7Q86V35 215 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 ZBTB8OSQ8IWT0 167 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 LRRC43Q8N309 656 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 KLHL23Q8NBE8 558 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 PGBD4Q96DM1 585 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 CDK5RAP3Q96JB5 506 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 PRIMPOLQ96LW4 560 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 MRPL9Q9BYD2 267 aaKnown RBP12.33□□□□□ -0.44
SMG6-206ENST00000570668 C2orf40Q9H1Z8 148 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 FZD8Q9H461 694 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 CWH43Q9H720 699 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 PRDM6Q9NQX0 595 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 AAASQ9NRG9 546 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
SMG6-206ENST00000570668 MORC2Q9Y6X9 1032 aaPredicted RBP12.33□□□□□ -0.44
SMG6-206ENST00000570668 A0A1B0GUA9 196 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 MEIS3P2A8K0S8 358 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 ITGB1P05556 798 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 HSP90AA1P07900 732 aaKnown RBP12.32□□□□□ -0.44
SMG6-206ENST00000570668 LAG3P18627 525 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
SMG6-206ENST00000570668 CAMK1Q14012 370 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 CSPP1Q1MSJ5 1256 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 TIGD5Q53EQ6 642 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 SPOUT1Q5T280 376 aaKnown RBP12.32□□□□□ -0.44
SMG6-206ENST00000570668 GLB1LQ6UWU2 654 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 AGMOQ6ZNB7 445 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 DAW1Q8N136 415 aa12.32□□□□□ -0.44
SMG6-206ENST00000570668 SYT2Q8N9I0 419 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms