RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 DACT1Q9NYF0 836 aa13.58□□□□□ -0.24
CAPN3-220ENST00000569827 SUCLA2Q9P2R7 463 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-220ENST00000569827 SPDYE4A6NLX3 237 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 DDX11L8A8MPP1 907 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 EOMESO95936 686 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 GALTP07902 379 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 RPS6KB1P23443 525 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 MTHFRP42898 656 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 JAK3P52333 1124 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 NLRP5P59047 1200 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 RNASELQ05823 741 aaKnown RBP13.57□□□□□ -0.24
CAPN3-220ENST00000569827 ITIH3Q06033 890 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 KIAA1841Q6NSI8 718 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 CATSPER4Q7RTX7 472 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 ZNF579Q8NAF0 562 aaKnown RBP13.57□□□□□ -0.24
CAPN3-220ENST00000569827 CCDC148Q8NFR7 591 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 SLC22A17Q8WUG5 538 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 NECTIN4Q96NY8 510 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 FAM105AQ9NUU6 356 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 FRYLO94915 3013 aa13.57□□□□□ -0.24
CAPN3-220ENST00000569827 COL4A3Q01955 1670 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 CACNA1IQ9P0X4 2223 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 FANCMQ8IYD8 2048 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 EML1O00423 815 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 C2CD2LO14523 706 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 OFD1O75665 1012 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 DDHD2O94830 711 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
CAPN3-220ENST00000569827 CTSAP10619 480 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 SFPQP23246 707 aaKnown RBP eCLIP13.56□□□□□ -0.24
CAPN3-220ENST00000569827 SFNP31947 248 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 NPEPPSP55786 919 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 PTPN14Q15678 1187 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 NOMO2Q5JPE7 1267 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 CWF19L1Q69YN2 538 aaKnown RBP13.56□□□□□ -0.24
CAPN3-220ENST00000569827 GLB1LQ6UWU2 654 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 FRMD5Q7Z6J6 570 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 CABP7Q86V35 215 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 FLCNQ8NFG4 579 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 RIT2Q99578 217 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 RNF26Q9BY78 433 aaPredicted RBP13.56□□□□□ -0.24
CAPN3-220ENST00000569827 MFSD1Q9H3U5 465 aa13.56□□□□□ -0.24
CAPN3-220ENST00000569827 VWA8A3KMH1 1905 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 IGKV6-21A0A0C4DH24 114 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 SLC37A4O43826 429 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 POMCP01189 267 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 PDIA3P30101 505 aaKnown RBP13.55□□□□□ -0.24
CAPN3-220ENST00000569827 XKR3Q5GH77 459 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 ATAT1Q5SQI0 421 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 MCTP2Q6DN12 878 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 AGMOQ6ZNB7 445 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 ANO5Q75V66 913 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 DDX53Q86TM3 631 aaKnown RBP13.55□□□□□ -0.24
CAPN3-220ENST00000569827 UBALD2Q8IYN6 164 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 ST13P5Q8NFI4 369 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-220ENST00000569827 TMEM143Q96AN5 459 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 NIFKQ9BYG3 293 aaKnown RBP13.55□□□□□ -0.24
CAPN3-220ENST00000569827 MINDY3Q9H8M7 445 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 WRAP73Q9P2S5 460 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-220ENST00000569827 PCDHB2Q9Y5E7 798 aa13.55□□□□□ -0.24
CAPN3-220ENST00000569827 ZNF292O60281 2723 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 PRR23AA6NEV1 266 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 F8W810 466 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 PI15O43692 258 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 NARSO43776 548 aaKnown RBP13.54□□□□□ -0.24
CAPN3-220ENST00000569827 MAFO75444 373 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-220ENST00000569827 CNPP09543 421 aaKnown RBP13.54□□□□□ -0.24
CAPN3-220ENST00000569827 IFNAR1P17181 557 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 HSPA4P34932 840 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 USP11P51784 963 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 STK3Q13188 491 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 INF2Q27J81 1249 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 Q4G0T1 1027 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 ASTLQ6HA08 431 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-220ENST00000569827 B3GNT9Q6UX72 402 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 FAM43BQ6ZT52 329 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-220ENST00000569827 ZDHHC14Q8IZN3 488 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 ETNPPLQ8TBG4 499 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 RSAD2Q8WXG1 361 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 KCNB2Q92953 911 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 KLHL5Q96PQ7 755 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 IFT122Q9HBG6 1241 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 CHST12Q9NRB3 414 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 DZANK1Q9NVP4 752 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 KCNJ14Q9UNX9 436 aa13.54□□□□□ -0.24
CAPN3-220ENST00000569827 PRG3Q9Y2Y8 225 aaPredicted RBP13.54□□□□□ -0.24
CAPN3-220ENST00000569827 N4BP1O75113 896 aaKnown RBP13.53□□□□□ -0.24
CAPN3-220ENST00000569827 SRGAP2CP0DJJ0 459 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 KLRC2P26717 231 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 DNM2P50570 870 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 CLCN4P51793 760 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 TOB2Q14106 344 aaPredicted RBP13.53□□□□□ -0.24
CAPN3-220ENST00000569827 BMS1Q14692 1282 aaKnown RBP13.53□□□□□ -0.24
CAPN3-220ENST00000569827 NPY5RQ15761 445 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 CCDC149Q6ZUS6 474 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 TAS1R1Q7RTX1 841 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 ZNF410Q86VK4 478 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 BLIDQ8IZY5 108 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms