RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	C5orf60	A6NFR6	353 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	DDN	O94850	711 aa	Predicted RBP	12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	ATP6V1G2	O95670	118 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	CCNE1	P24864	410 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	RPA1	P27694	616 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	PPP1R2	P41236	205 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	MAGEA1	P43355	309 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	PPARD	Q03181	441 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	SETDB1	Q15047	1291 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	KLHDC7A	Q5VTJ3	777 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	CPXCR1	Q8N123	301 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	ANKRD13C	Q8N6S4	541 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	SPDL1	Q96EA4	605 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	KRT12	Q99456	494 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	AS3MT	Q9HBK9	375 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	NOD2	Q9HC29	1040 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	RAVER2	Q9HCJ3	691 aa	Known RBP	12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	SLC39A2	Q9NP94	309 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	BUB1B	O60566	1050 aa	Predicted RBP	12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	PSMD10	O75832	226 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	PLA2G4B	P0C869	781 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	GHR	P10912	638 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	BIRC3	Q13489	604 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	ODF2	Q5BJF6	829 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	ERMN	Q8TAM6	284 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	SLC5A5	Q92911	643 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	TBC1D31	Q96DN5	1066 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	WNK4	Q96J92	1243 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	C12orf42	Q96LP6	360 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	BAIAP2L1	Q9UHR4	511 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	SALL4	Q9UJQ4	1053 aa		12.99	□□□□□ -0.33
SPG7-222	ENST00000569820	EML1	O00423	815 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	SKAP2	O75563	359 aa	Predicted RBP	12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	ALAS1	P13196	640 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	TMOD1	P28289	359 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	SLC12A3	P55017	1021 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	ELF3	P78545	371 aa	Predicted RBP	12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	BYSL	Q13895	437 aa	Known RBP	12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	ACCSL	Q4AC99	568 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	CEP55	Q53EZ4	464 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	NOL9	Q5SY16	702 aa	Known RBP	12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	ANKRD40	Q6AI12	368 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	RUFY4	Q6ZNE9	571 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	CCT6B	Q92526	530 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	ZBTB10	Q96DT7	871 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	KDM4C	Q9H3R0	1056 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	FRMPD4	Q14CM0	1322 aa		12.98	□□□□□ -0.33
SPG7-222	ENST00000569820	BICDL2	A1A5D9	508 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	PJA2	O43164	708 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	BUB1	O43683	1085 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	FAM163B	P0C2L3	166 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	CYP11B2	P19099	503 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	HSD17B3	P37058	310 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	DNA2	P51530	1060 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	HMGCS2	P54868	508 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	PPP2R2A	P63151	447 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	COASY	Q13057	564 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	MIIP	Q5JXC2	388 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	HIBCH	Q6NVY1	386 aa	Predicted RBP	12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	SLC30A10	Q6XR72	485 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	CPLX4	Q7Z7G2	160 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	RNF10	Q8N5U6	811 aa	Known RBP	12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	ATG4C	Q96DT6	458 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	SEMA6B	Q9H3T3	888 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	RNF181	Q9P0P0	153 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	STK24	Q9Y6E0	443 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	ZHX2	Q9Y6X8	837 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	LOXHD1	Q8IVV2	1947 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	GRID2IP	A4D2P6	1211 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	MEIS1	O00470	390 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	VWA5A	O00534	786 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	BACH1	O14867	736 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	RTN3	O95197	1032 aa	Predicted RBP	12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	PAEP	P09466	180 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	IMPDH2	P12268	514 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	YBX3	P16989	372 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	CTNNA1	P35221	906 aa	Known RBP	12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	PSMC6	P62333	389 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	PPP2R5C	Q13362	524 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	PPP1R7	Q15435	360 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	TRADD	Q15628	312 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	CENPP	Q6IPU0	288 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	OTOP1	Q7RTM1	612 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	GPBP1	Q86WP2	473 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	MCF2L2	Q86YR7	1114 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	GUF1	Q8N442	669 aa	Known RBP	12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	GLIS3	Q8NEA6	775 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.97	□□□□□ -0.33	2e-6	■□□□□ 9.5
SPG7-222	ENST00000569820	IL31RA	Q8NI17	732 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	NSMCE1	Q8WV22	266 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	LMBR1	Q8WVP7	490 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	RAPGEF5	Q92565	580 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	SYT17	Q9BSW7	474 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	HOMER2	Q9NSB8	354 aa		12.97	□□□□□ -0.33
SPG7-222	ENST00000569820	AR	P10275	920 aa		12.96	□□□□□ -0.33
SPG7-222	ENST00000569820	TNNC1	P63316	161 aa		12.96	□□□□□ -0.33

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