RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ASIC2Q16515 512 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 SLC18A3Q16572 532 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 ZC2HC1CQ53FD0 456 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-213ENST00000569687 OTUD6AQ7L8S5 288 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CTAGE6Q86UF2 777 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 PACS2Q86VP3 889 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CTAGE4Q8IX94 777 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 FAM186BQ8IYM0 893 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CHST13Q8NET6 341 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 DNERQ8NFT8 737 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 SECISBP2LQ93073 1101 aaKnown RBP5.88□□□□□ -1.47
SF3B3-213ENST00000569687 HVCN1Q96D96 273 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 DRC1Q96MC2 740 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 ACCSQ96QU6 501 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 WRNIP1Q96S55 665 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CRACR2AQ9BSW2 395 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 TEX13BQ9BXU2 312 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 STK33Q9BYT3 514 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 DEF6Q9H4E7 631 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 AGPAT3Q9NRZ7 376 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 ZNF446Q9NWS9 450 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CYP39A1Q9NYL5 469 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 GGA3Q9NZ52 723 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 RNF14Q9UBS8 474 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 TRIM10Q9UDY6 481 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 INTUQ9ULD6 942 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 NENFQ9UMX5 172 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 FRMD4BQ9Y2L6 1034 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 PCDHA10Q9Y5I2 948 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 DUSP10Q9Y6W6 482 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 PFASO15067 1338 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 ZMYM2Q9UBW7 1377 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 TARSL2A2RTX5 802 aaKnown RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 GLTPD2A6NH11 291 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 CLIC2O15247 247 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 RGS20O76081 388 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 ATP1A1P05023 1023 aaKnown RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 PSAPP07602 524 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 CCDC172P0C7W6 258 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 MYCLP12524 364 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 KCNA2P16389 499 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 FERP16591 822 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 TCP1P17987 556 aaKnown RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 EIF2AK2P19525 551 aaKnown RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 SOX11P35716 441 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 STAT1P42224 750 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 FMO5P49326 533 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 HMGCS2P54868 508 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 NCKAP1LP55160 1127 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 NPEPPSP55786 919 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 FAM193AP78312 1265 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 GFPT1Q06210 699 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 CKAP4Q07065 602 aaKnown RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 KLHL30Q0D2K2 578 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 DGKZQ13574 1117 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 TCEAL1Q15170 157 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 SNRNP48Q6IEG0 339 aaKnown RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 WDR93Q6P2C0 686 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 TMCO3Q6UWJ1 677 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 ABHD15Q6UXT9 468 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 NSMFQ6X4W1 530 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 LBX2Q6XYB7 198 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 INTS8Q75QN2 995 aaKnown RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 ANO5Q75V66 913 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 HAUS6Q7Z4H7 955 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 SYCP3Q8IZU3 236 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 SLC30A5Q8TAD4 765 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 LMO3Q8TAP4 145 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 KIFAP3Q92845 792 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 WNK4Q96J92 1243 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 FBXL18Q96ME1 805 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 NOX5Q96PH1 765 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 SYT11Q9BT88 431 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 UBXN6Q9BZV1 441 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 ACAD9Q9H845 621 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 ANKZF1Q9H8Y5 726 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 POLD4Q9HCU8 107 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 ARFGAP3Q9NP61 516 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 NLRC4Q9NPP4 1024 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 FBXO40Q9UH90 709 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 SNX12Q9UMY4 172 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 GNEQ9Y223 722 aaKnown RBP5.87□□□□□ -1.47
SF3B3-213ENST00000569687 FHOD1Q9Y613 1164 aa5.87□□□□□ -1.47
SF3B3-213ENST00000569687 ATAD5Q96QE3 1844 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 WDR90Q96KV7 1748 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 SSC5DA1L4H1 1573 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 A0A087X0T9 212 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 IGKV6D-21A0A0A0MT36 114 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 A0A0A6YYK5 440 aaPredicted RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 H0YCG3 227 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 DDX39AO00148 427 aaKnown RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 CES2O00748 559 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 MAP2K7O14733 419 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 EXOC3O60645 756 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 N4BP1O75113 896 aaKnown RBP5.86□□□□□ -1.47
SF3B3-213ENST00000569687 FAM228BP0C875 321 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 TGFB3P10600 412 aa5.86□□□□□ -1.47
SF3B3-213ENST00000569687 ACTN1P12814 892 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms