RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 RNF19AQ9NV58 838 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 DNM3Q9UQ16 869 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 SQORQ9Y6N5 450 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 A0A0C4DFX4 3053 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 CCDC169A6NNP5 214 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 MEIS3P2A8K0S8 358 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 LAD1O00515 517 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 B4GALT5O43286 388 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 DGKIO75912 1065 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 ERLIN2O94905 339 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 LYPLA2O95372 231 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 STAG3L1P0CL83 205 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 ARL2P36404 184 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 PBX3P40426 434 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 UBA7P41226 1012 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 PHKA2P46019 1235 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 HTRA4P83105 476 aaPredicted RBP10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 GRB10Q13322 594 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 CAPSQ13938 189 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 TFDP1Q14186 410 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 PDIA5Q14554 519 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 KARSQ15046 597 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 EPC2Q52LR7 807 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 SLC24A5Q71RS6 500 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 ZNF410Q86VK4 478 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 NPAS4Q8IUM7 802 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 TMEM192Q8IY95 271 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 HELQQ8TDG4 1101 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 BSNDQ8WZ55 320 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 PNMA5Q96PV4 448 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 RUSC1Q9BVN2 902 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 CSRNP2Q9H175 543 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 ALG13Q9NP73 1137 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 INPP5FQ9Y2H2 1132 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 MRPL42Q9Y6G3 142 aaKnown RBP10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 COL4A4P53420 1690 aaPredicted RBP10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 NLRC5Q86WI3 1866 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 ADGRA3Q8IWK6 1321 aa10.01□□□□□ -0.81
GTF3C1-210ENST00000569394 TTC3P53804 2025 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 TMEM265A0A087WTH1 108 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 C9IYK1 514 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 PRPHP41219 470 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 GPM6BQ13491 265 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 DSC3Q14574 896 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 STK38Q15208 465 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 EP400NLQ6ZTU2 488 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 USP49Q70CQ1 688 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 ECHDC2Q86YB7 292 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 EXOC8Q8IYI6 725 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 ABI1Q8IZP0 508 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 CALML4Q96GE6 196 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 EPSTI1Q96J88 318 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 COL25A1Q9BXS0 654 aaPredicted RBP10□□□□□ -0.81
GTF3C1-210ENST00000569394 GBP3Q9H0R5 595 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 ZHX3Q9H4I2 956 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 C1orf112Q9NSG2 853 aa10□□□□□ -0.81
GTF3C1-210ENST00000569394 DBR1Q9UK59 544 aaKnown RBP10□□□□□ -0.81
GTF3C1-210ENST00000569394 KIAA1671Q9BY89 1806 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 TTLL13PA6NNM8 815 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 NT5C1B-RDH14C9J2C7 533 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 TULP1O00294 542 aaPredicted RBP9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 ASAP2O43150 1006 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 HIP1RO75146 1068 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 EYA4O95677 639 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 KRT18P05783 430 aaKnown RBP9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 XRCC6P12956 609 aaKnown RBP eCLIP9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 CYP11B2P19099 503 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 CA8P35219 290 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 PEX3P56589 373 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 PTENP60484 403 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 ERVK-21P61565 698 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 CDC42EP1Q00587 391 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 MXD4Q14582 209 aaPredicted RBP9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 PTPAQ15257 358 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 SRGAP1Q7Z6B7 1085 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 DEPTORQ8TB45 409 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 ZNF689Q96CS4 500 aaPredicted RBP9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 EIF2AQ9BY44 585 aaKnown RBP9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 FAM105AQ9NUU6 356 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 TYW1Q9NV66 732 aaKnown RBP9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 HES2Q9Y543 173 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 PPME1Q9Y570 386 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 MTCH2Q9Y6C9 303 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 MYH15Q9Y2K3 1946 aa9.99□□□□□ -0.81
GTF3C1-210ENST00000569394 FNDC1Q4ZHG4 1894 aaPredicted RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 GRM6O15303 877 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 GAS2O43903 313 aaKnown RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 TSPAN1O60635 241 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 LPXNO60711 386 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 NPTXRO95502 500 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 F13A1P00488 732 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 POMCP01189 267 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 PLA2G4BP0C869 781 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 ZSCAN22P10073 491 aaPredicted RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 PLCG1P19174 1290 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 NCLP19338 710 aaKnown RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 HOXA11P31270 313 aaPredicted RBP9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 MBTD1Q05BQ5 628 aa9.98□□□□□ -0.81
GTF3C1-210ENST00000569394 MCM6Q14566 821 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms