RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 BECN1Q14457 450 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 IL17AQ16552 155 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 TJAP1Q5JTD0 557 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 HYIQ5T013 277 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 FAM102BQ5T8I3 360 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 CABP7Q86V35 215 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 CRIPAKQ8N1N5 446 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 CCDC51Q96ER9 411 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 IFT74Q96LB3 600 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 DRC1Q96MC2 740 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 C11orf84Q9BUA3 381 aaPredicted RBP10.88□□□□□ -0.67
CLN6-209ENST00000569336 TIPINQ9BVW5 301 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 MRPL9Q9BYD2 267 aaKnown RBP10.88□□□□□ -0.67
CLN6-209ENST00000569336 CERS4Q9HA82 394 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 LMCD1Q9NZU5 365 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 KCND2Q9NZV8 630 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
CLN6-209ENST00000569336 MTUS1Q9ULD2 1270 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 MORC2Q9Y6X9 1032 aaPredicted RBP10.88□□□□□ -0.67
CLN6-209ENST00000569336 CARNS1A5YM72 827 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 C5orf67F2Z3F1 127 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 INO80B-WBP1J3KQ70 363 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 CSDE1O75534 798 aaKnown RBP10.87□□□□□ -0.67
CLN6-209ENST00000569336 ARHGEF15O94989 841 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 RB1P06400 928 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 POU3F3P20264 500 aaPredicted RBP10.87□□□□□ -0.67
CLN6-209ENST00000569336 FGFR4P22455 802 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 IGFBP4P22692 258 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 GLRA2P23416 452 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 NAMPTP43490 491 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 ZRSR1Q15695 479 aaKnown RBP10.87□□□□□ -0.67
CLN6-209ENST00000569336 PTPROQ16827 1216 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 PAN2Q504Q3 1202 aaKnown RBP10.87□□□□□ -0.67
CLN6-209ENST00000569336 EPC2Q52LR7 807 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 CDCA2Q69YH5 1023 aaPredicted RBP10.87□□□□□ -0.67
CLN6-209ENST00000569336 NOTUMQ6P988 496 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 ECHDC2Q86YB7 292 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 TMEM192Q8IY95 271 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 LRRC43Q8N309 656 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 ASAP3Q8TDY4 903 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 GDPD5Q8WTR4 605 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 CLP1Q92989 425 aaKnown RBP10.87□□□□□ -0.67
CLN6-209ENST00000569336 PGBD4Q96DM1 585 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 PRIMPOLQ96LW4 560 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 ZNF396Q96N95 335 aaPredicted RBP10.87□□□□□ -0.67
CLN6-209ENST00000569336 C17orf80Q9BSJ5 609 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 MMTAG2Q9BU76 263 aaKnown RBP10.87□□□□□ -0.67
CLN6-209ENST00000569336 PLVAPQ9BX97 442 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 AAASQ9NRG9 546 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 PRMT7Q9NVM4 692 aaPredicted RBP10.87□□□□□ -0.67
CLN6-209ENST00000569336 VWA8A3KMH1 1905 aa10.87□□□□□ -0.67
CLN6-209ENST00000569336 CNTNAP2Q9UHC6 1331 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 TBKBP1A7MCY6 615 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 E9PMD0 336 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 ZSCAN22P10073 491 aaPredicted RBP10.86□□□□□ -0.67
CLN6-209ENST00000569336 CDC25AP30304 524 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 EFNA5P52803 228 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 FAM189BP81408 668 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 MBTD1Q05BQ5 628 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 DMP1Q13316 513 aaPredicted RBP10.86□□□□□ -0.67
CLN6-209ENST00000569336 GRB10Q13322 594 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 ECM1Q16610 540 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 CSPP1Q1MSJ5 1256 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 NAALADL2Q58DX5 795 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 MAEAQ7L5Y9 396 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 HACE1Q8IYU2 909 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 RNF169Q8NCN4 708 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 CNNM3Q8NE01 707 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 DEPTORQ8TB45 409 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 P2RX5Q93086 422 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 TMEM117Q9H0C3 514 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 MINDY3Q9H8M7 445 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 C17orf75Q9HAS0 396 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 GPRC5CQ9NQ84 441 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 FAM105AQ9NUU6 356 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 KCNG1Q9UIX4 513 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 CLIC4Q9Y696 253 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 PLXNA3P51805 1871 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 ZMYM2Q9UBW7 1377 aa10.86□□□□□ -0.67
CLN6-209ENST00000569336 TTC28Q96AY4 2481 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 SPTBN5Q9NRC6 3674 aaKnown RBP10.85□□□□□ -0.67
CLN6-209ENST00000569336 C2orf16Q68DN1 1984 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 A0A087WWV3 80 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 H3BNC9 293 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 TSPAN1O60635 241 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 ZNF623O75123 536 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 F13A1P00488 732 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 SSBP05455 408 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLN6-209ENST00000569336 FGFR1P11362 822 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 LAG3P18627 525 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 GUCY2CP25092 1073 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 NASPP49321 788 aaPredicted RBP10.85□□□□□ -0.67
CLN6-209ENST00000569336 CEBPZQ03701 1054 aaKnown RBP10.85□□□□□ -0.67
CLN6-209ENST00000569336 GPM6BQ13491 265 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 ADGRE1Q14246 886 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 STK38Q15208 465 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 PTPAQ15257 358 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 MAPK6Q16659 721 aa10.85□□□□□ -0.67
CLN6-209ENST00000569336 TMEM132AQ24JP5 1023 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms