RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SLC30A4O14863 429 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 LILRB3O75022 631 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 N4BP1O75113 896 aaKnown RBP9.81□□□□□ -0.84
SMG1-216ENST00000569122 ZNF623O75123 536 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 NR1I2O75469 434 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 PAPLNO95428 1278 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 CLCN3P51790 818 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 AK2P54819 239 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 HDAC1Q13547 482 aaPredicted RBP9.81□□□□□ -0.84
SMG1-216ENST00000569122 UBE2SQ16763 222 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 PPM1JQ5JR12 505 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 ZBTB41Q5SVQ8 909 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 TWF2Q6IBS0 349 aaKnown RBP9.81□□□□□ -0.84
SMG1-216ENST00000569122 CASC1Q6TDU7 716 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 MTSS1LQ765P7 747 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 CCDC60Q8IWA6 550 aaPredicted RBP9.81□□□□□ -0.84
SMG1-216ENST00000569122 MAML2Q8IZL2 1156 aaPredicted RBP9.81□□□□□ -0.84
SMG1-216ENST00000569122 ZNF654Q8IZM8 581 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 CELF5Q8N6W0 485 aaKnown RBP9.81□□□□□ -0.84
SMG1-216ENST00000569122 RPS6KC1Q96S38 1066 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 MYADMQ96S97 322 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 OSBPL3Q9H4L5 887 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 LY9Q9HBG7 655 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 TBC1D13Q9NVG8 400 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 ANGPTL2Q9UKU9 493 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 MRPS17Q9Y2R5 130 aaKnown RBP9.81□□□□□ -0.84
SMG1-216ENST00000569122 PCDHA10Q9Y5I2 948 aa9.81□□□□□ -0.84
SMG1-216ENST00000569122 DDX39AO00148 427 aaKnown RBP9.8□□□□□ -0.84
SMG1-216ENST00000569122 IPO5O00410 1097 aaKnown RBP9.8□□□□□ -0.84
SMG1-216ENST00000569122 LILRB5O75023 590 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 OFD1O75665 1012 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 CCNE2O96020 404 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 SOD2P04179 222 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 GLULP15104 373 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 RPS9P46781 194 aaKnown RBP9.8□□□□□ -0.84
SMG1-216ENST00000569122 SLC11A1P49279 550 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 DNM2P50570 870 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 GPC3P51654 580 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 CREMQ03060 361 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 AP3B2Q13367 1082 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 HTR4Q13639 388 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 UBXN2BQ14CS0 331 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 MLF2Q15773 248 aaPredicted RBP9.8□□□□□ -0.84
SMG1-216ENST00000569122 SLC44A4Q53GD3 710 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 NFXL1Q6ZNB6 911 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 HEATR3Q7Z4Q2 680 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 TMEM173Q86WV6 379 aaPredicted RBP9.8□□□□□ -0.84
SMG1-216ENST00000569122 GPR65Q8IYL9 337 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 SRBD1Q8N5C6 995 aaKnown RBP9.8□□□□□ -0.84
SMG1-216ENST00000569122 IGDCC4Q8TDY8 1250 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 RUFY2Q8WXA3 655 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 IER2Q9BTL4 223 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 DDX23Q9BUQ8 820 aaKnown RBP9.8□□□□□ -0.84
SMG1-216ENST00000569122 FOXQ1Q9C009 403 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 GBP3Q9H0R5 595 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 UBN1Q9NPG3 1134 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 RIC8AQ9NPQ8 531 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMG1-216ENST00000569122 INPP5FQ9Y2H2 1132 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 NUMBLQ9Y6R0 609 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 CFAP47Q6ZTR5 3102 aa9.8□□□□□ -0.84
SMG1-216ENST00000569122 KIAA1671Q9BY89 1806 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 GPR179Q6PRD1 2367 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 POTEMA6NI47 508 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 CCDC69A6NI79 296 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 hCG_1984214I3L0E3 225 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 GAS2O43903 313 aaKnown RBP9.79□□□□□ -0.84
SMG1-216ENST00000569122 SSBP05455 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG1-216ENST00000569122 RETP07949 1114 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 ATP4AP20648 1035 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 SREBF1P36956 1147 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 GPC5P78333 572 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 SETQ01105 290 aaPredicted RBP9.79□□□□□ -0.84
SMG1-216ENST00000569122 SNW1Q13573 536 aaKnown RBP9.79□□□□□ -0.84
SMG1-216ENST00000569122 LAIR1Q6GTX8 287 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 GET4Q7L5D6 327 aaPredicted RBP9.79□□□□□ -0.84
SMG1-216ENST00000569122 PLA2G4DQ86XP0 818 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 LINC01465Q8N7H1 131 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 ZNF713Q8N859 430 aaPredicted RBP9.79□□□□□ -0.84
SMG1-216ENST00000569122 NELL1Q92832 810 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 ZNF577Q9BSK1 485 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 PRKD2Q9BZL6 878 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 LNPKQ9C0E8 428 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 NT5C3AQ9H0P0 336 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 RXFP1Q9HBX9 757 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 SH2B1Q9NRF2 756 aaPredicted RBP9.79□□□□□ -0.84
SMG1-216ENST00000569122 FAM105AQ9NUU6 356 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 SAMM50Q9Y512 469 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 CNTNAP2Q9UHC6 1331 aa9.79□□□□□ -0.84
SMG1-216ENST00000569122 FNDC1Q4ZHG4 1894 aaPredicted RBP9.79□□□□□ -0.84
SMG1-216ENST00000569122 WDR64B1ANS9 1081 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 E7EWF7 191 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 C2CD2LO14523 706 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 TEX28O15482 410 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 CYP21A2P08686 494 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 TGM1P22735 817 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 FSHRP23945 695 aa9.78□□□□□ -0.84
SMG1-216ENST00000569122 GLUD2P49448 558 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms