RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	FAM105A	Q9NUU6	356 aa		11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	TYW1	Q9NV66	732 aa	Known RBP	11.52	□□□□□ -0.57
UBR1-207	ENST00000568782	DBR1	Q9UK59	544 aa	Known RBP	11.52	□□□□□ -0.57
UBR1-207	ENST00000568782		A0A0C4DFX4	3053 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	LRRIQ4	A6NIV6	560 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	WNT7A	O00755	349 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	GRM6	O15303	877 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	CSPG5	O95196	566 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	SRGAP2B	P0DMP2	458 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	KCNA5	P22460	613 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	PRPH	P41219	470 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	GATM	P50440	423 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	TFF2	Q03403	129 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	PPP2R5A	Q15172	486 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	TCEAL5	Q5H9L2	206 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	NOTUM	Q6P988	496 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	MAEA	Q7L5Y9	396 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	ZNF579	Q8NAF0	562 aa	Known RBP	11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	HELQ	Q8TDG4	1101 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	ADAMTS19	Q8TE59	1207 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	POF1B	Q8WVV4	589 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	PABPC5	Q96DU9	382 aa	Known RBP	11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	CDK5RAP3	Q96JB5	506 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	IFT74	Q96LB3	600 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	IGFLR1	Q9H665	355 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	IFT122	Q9HBG6	1241 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	TLR9	Q9NR96	1032 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	AGPAT5	Q9NUQ2	364 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	CLDND1	Q9NY35	253 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	KANSL3	Q9P2N6	904 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	DNM3	Q9UQ16	869 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	PLXNA4	Q9HCM2	1894 aa		11.51	□□□□□ -0.57
UBR1-207	ENST00000568782	MYH11	P35749	1972 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	RBAK-RBAKDN	I3L0D1	243 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	ZNF623	O75123	536 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	MED24	O75448	989 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	FGF18	O76093	207 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	ITGB1	P05556	798 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	CA8	P35219	290 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	PTEN	P60484	403 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	PADI6	Q6TGC4	694 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	KCNT2	Q6UVM3	1135 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	COLGALT1	Q8NBJ5	622 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	SPPL3	Q8TCT6	385 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	SNX29	Q8TEQ0	813 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	CCDC51	Q96ER9	411 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	TMEM169	Q96HH4	297 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	CASD1	Q96PB1	797 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	UHRF1	Q96T88	793 aa	Predicted RBP	11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	BACH2	Q9BYV9	841 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	C2orf40	Q9H1Z8	148 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	SPG21	Q9NZD8	308 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	DAXX	Q9UER7	740 aa	Predicted RBP	11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	PCDHB6	Q9Y5E3	794 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	PCDHB2	Q9Y5E7	798 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	CNTNAP2	Q9UHC6	1331 aa		11.5	□□□□□ -0.57
UBR1-207	ENST00000568782	TDRD15	B5MCY1	1934 aa	Known RBP	11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	TNFRSF10A	O00220	468 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	NR1I2	O75469	434 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	BMP15	O95972	392 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	SPATA31C1	P0DKV0	1188 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	ITGA4	P13612	1032 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	ARL2	P36404	184 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	KCNQ1	P51787	676 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	NBR1	Q14596	966 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	ZRSR1	Q15695	479 aa	Known RBP	11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	NOMO2	Q5JPE7	1267 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	POTEG	Q6S5H5	508 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	BRAP	Q7Z569	592 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	DEPTOR	Q8TB45	409 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	MRPS27	Q92552	414 aa	Known RBP	11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	NFKBIZ	Q9BYH8	718 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	NT5C3A	Q9H0P0	336 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	TLE6	Q9H808	572 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	ENTPD7	Q9NQZ7	604 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	DDX19A	Q9NUU7	478 aa	Known RBP	11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	STK39	Q9UEW8	545 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	KCNG1	Q9UIX4	513 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	KIAA1024	Q9UPX6	916 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	LZTS1	Q9Y250	596 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	INPP5F	Q9Y2H2	1132 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782	MYO7A	Q13402	2215 aa		11.49	□□□□□ -0.57
UBR1-207	ENST00000568782		A0A087WWV3	80 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	VPS37C	A5D8V6	355 aa	Predicted RBP	11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	CD2BP2	O95400	341 aa	Known RBP	11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	HSP90AA1	P07900	732 aa	Known RBP	11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	LINC00271	P0C7V0	271 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	BMP1	P13497	986 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	CYP11B2	P19099	503 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	NDUFV1	P49821	464 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	PLCB3	Q01970	1234 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	CAPS	Q13938	189 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	LEXM	Q3ZCV2	418 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	LONRF3	Q496Y0	759 aa		11.48	□□□□□ -0.57
UBR1-207	ENST00000568782	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.48	□□□□□ -0.57

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