RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PGRP06401 933 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 EEF2P13639 858 aaKnown RBP6.74□□□□□ -1.33
CDH13-211ENST00000568770 PLCG1P19174 1290 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 COPB2P35606 906 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 RARSP54136 660 aaKnown RBP6.74□□□□□ -1.33
CDH13-211ENST00000568770 CCL23P55773 120 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 KRT40Q6A162 431 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 SNRNP48Q6IEG0 339 aaKnown RBP6.74□□□□□ -1.33
CDH13-211ENST00000568770 TMED8Q6PL24 325 aaPredicted RBP6.74□□□□□ -1.33
CDH13-211ENST00000568770 REPS2Q8NFH8 660 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 ZNF507Q8TCN5 953 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 SSH3Q8TE77 659 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 GATA6Q92908 595 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 DDX11Q96FC9 970 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 PSMG3-AS1Q96PY0 264 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 CRNKL1Q9BZJ0 848 aaKnown RBP6.74□□□□□ -1.33
CDH13-211ENST00000568770 UPF3AQ9H1J1 476 aaKnown RBP6.74□□□□□ -1.33
CDH13-211ENST00000568770 CERS4Q9HA82 394 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 SSU72Q9NP77 194 aaKnown RBP6.74□□□□□ -1.33
CDH13-211ENST00000568770 DCP1AQ9NPI6 582 aaPredicted RBP6.74□□□□□ -1.33
CDH13-211ENST00000568770 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 PCOLCE2Q9UKZ9 415 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 PPT2Q9UMR5 302 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 TNNQ9UQP3 1299 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 RIPK3Q9Y572 518 aa6.74□□□□□ -1.33
CDH13-211ENST00000568770 EPOPA6NHQ4 379 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 CHURC1-FNTBB4DL54 471 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 SMIM22K7EJ46 135 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 B4GALT4O60513 344 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 CA3P07451 260 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 TRIM27P14373 513 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 PDE6AP16499 860 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 ATP2A2P16615 1042 aaKnown RBP6.73□□□□□ -1.33
CDH13-211ENST00000568770 POU3F3P20264 500 aaPredicted RBP6.73□□□□□ -1.33
CDH13-211ENST00000568770 ATP8B2P98198 1209 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 BEX3Q00994 111 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 CDK5R2Q13319 367 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 NAALADL2Q58DX5 795 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 FAM83BQ5T0W9 1011 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 SLC9C2Q5TAH2 1124 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 CXCL17Q6UXB2 119 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 LCORLQ8N3X6 602 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 SLC43A3Q8NBI5 491 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 VWCEQ96DN2 955 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 TEX13BQ9BXU2 312 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 TRPV6Q9H1D0 765 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 WNT8AQ9H1J5 351 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 ABHD16BQ9H3Z7 469 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 EHMT1Q9H9B1 1298 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 COG5Q9UP83 839 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 MYO15AQ9UKN7 3530 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 DMDP11532 3685 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 GRIN2DO15399 1336 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 ZNF532Q9HCE3 1301 aa6.73□□□□□ -1.33
CDH13-211ENST00000568770 CYP2D7A0A087X1C5 515 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.72□□□□□ -1.33
CDH13-211ENST00000568770 PRKAB2O43741 272 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 ATE1O95260 518 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 IGHA1P01876 353 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 H2AFB1P0C5Y9 115 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 H2AFB2P0C5Z0 115 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
CDH13-211ENST00000568770 SOX9P48436 509 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 NASPP49321 788 aaPredicted RBP6.72□□□□□ -1.33
CDH13-211ENST00000568770 NKX3-2P78367 333 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 ITGA7Q13683 1181 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 MAP7Q14244 749 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 TMEM67Q5HYA8 995 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 TMEM201Q5SNT2 666 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 CCDC81Q6ZN84 652 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 ARMCX2Q7L311 632 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 HID1Q8IV36 788 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 CCDC144CPQ8IYA2 1237 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 RPUSD2Q8IZ73 545 aaKnown RBP6.72□□□□□ -1.33
CDH13-211ENST00000568770 CPXCR1Q8N123 301 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 REXO1Q8N1G1 1221 aaKnown RBP6.72□□□□□ -1.33
CDH13-211ENST00000568770 FRAT1Q92837 279 aaPredicted RBP6.72□□□□□ -1.33
CDH13-211ENST00000568770 SCLYQ96I15 445 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 CCDC17Q96LX7 622 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 FGD4Q96M96 766 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 NUP88Q99567 741 aaPredicted RBP6.72□□□□□ -1.33
CDH13-211ENST00000568770 DPH2Q9BQC3 489 aaPredicted RBP6.72□□□□□ -1.33
CDH13-211ENST00000568770 SLF1Q9BQI6 1058 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 KATNBL1Q9H079 304 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 ARMT1Q9H993 441 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 KANSL2Q9H9L4 492 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 CD320Q9NPF0 282 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 ASTN1O14525 1302 aa6.72□□□□□ -1.33
CDH13-211ENST00000568770 WDR87Q6ZQQ6 2873 aa6.71□□□□□ -1.33
CDH13-211ENST00000568770 NLRC5Q86WI3 1866 aa6.71□□□□□ -1.34
CDH13-211ENST00000568770 TCRBV5S4A2TA0A5A2 114 aa6.71□□□□□ -1.34
CDH13-211ENST00000568770 SLC22A31A6NKX4 558 aa6.71□□□□□ -1.34
CDH13-211ENST00000568770 PI4K2BG5E9Z4 385 aa6.71□□□□□ -1.34
CDH13-211ENST00000568770 IPO8O15397 1037 aaKnown RBP6.71□□□□□ -1.34
CDH13-211ENST00000568770 DYRK3O43781 588 aa6.71□□□□□ -1.34
CDH13-211ENST00000568770 LEFTY1O75610 366 aa6.71□□□□□ -1.34
CDH13-211ENST00000568770 CABYRO75952 493 aa6.71□□□□□ -1.34
CDH13-211ENST00000568770 PTGS1P23219 599 aa6.71□□□□□ -1.34
CDH13-211ENST00000568770 ITGB7P26010 798 aa6.71□□□□□ -1.34
CDH13-211ENST00000568770 ZNF165P49910 485 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms