RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
NME3-211ENST00000568561 C2orf16Q68DN1 1984 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 CPLX1O14810 134 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 MAFO75444 373 aaPredicted RBP17.42■□□□□ 0.38
NME3-211ENST00000568561 REC8O95072 547 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 DEXIO95424 95 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 NPEPPSP55786 919 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 NONOQ15233 471 aaKnown RBP eCLIP17.42■□□□□ 0.38
NME3-211ENST00000568561 CES5AQ6NT32 575 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 ZNF579Q8NAF0 562 aaKnown RBP17.42■□□□□ 0.38
NME3-211ENST00000568561 MBOAT7Q96N66 472 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 C22orf23Q9BZE7 217 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 ADAM7Q9H2U9 754 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 NRDE2Q9H7Z3 1164 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 ZSWIM6Q9HCJ5 1215 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 CHST12Q9NRB3 414 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 FAM105AQ9NUU6 356 aa17.42■□□□□ 0.38
NME3-211ENST00000568561 RNASELQ05823 741 aaKnown RBP17.41■□□□□ 0.38
NME3-211ENST00000568561 LETM2Q2VYF4 491 aa17.41■□□□□ 0.38
NME3-211ENST00000568561 NOMO2Q5JPE7 1267 aa17.41■□□□□ 0.38
NME3-211ENST00000568561 GLB1LQ6UWU2 654 aa17.41■□□□□ 0.38
NME3-211ENST00000568561 ZNF410Q86VK4 478 aa17.41■□□□□ 0.38
NME3-211ENST00000568561 DAGLBQ8NCG7 672 aa17.41■□□□□ 0.38
NME3-211ENST00000568561 IGSF21Q96ID5 467 aa17.41■□□□□ 0.38
NME3-211ENST00000568561 VN1R3Q9BXE9 311 aa17.41■□□□□ 0.38
NME3-211ENST00000568561 WRAP73Q9P2S5 460 aaPredicted RBP17.41■□□□□ 0.38
NME3-211ENST00000568561 NR2E1Q9Y466 385 aa17.41■□□□□ 0.38
NME3-211ENST00000568561 CYP46A1Q9Y6A2 500 aa17.41■□□□□ 0.38
NME3-211ENST00000568561 OFD1O75665 1012 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 BRD1O95696 1058 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 SSBP05455 408 aaKnown RBP eCLIP17.4■□□□□ 0.38
NME3-211ENST00000568561 ASGR2P07307 311 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 GALTP07902 379 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 AVPR2P30518 371 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 SLC11A1P49279 550 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 AFF1P51825 1210 aaKnown RBP17.4■□□□□ 0.38
NME3-211ENST00000568561 PSMC5P62195 406 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 ITIH3Q06033 890 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 ZNF280BQ86YH2 543 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 TMEM87AQ8NBN3 555 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 NECTIN4Q96NY8 510 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 SLKQ9H2G2 1235 aaPredicted RBP17.4■□□□□ 0.38
NME3-211ENST00000568561 CYP26B1Q9NR63 512 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 VAV3Q9UKW4 847 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 COL4A3BPQ9Y5P4 624 aa17.4■□□□□ 0.38
NME3-211ENST00000568561 PLXNA3P51805 1871 aa17.39■□□□□ 0.38
NME3-211ENST00000568561 MYO15AQ9UKN7 3530 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 CTSAP10619 480 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 MTHFRP42898 656 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 CDC42EP1Q00587 391 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 MTMR3Q13615 1198 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 MOXD1Q6UVY6 613 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 TMC5Q6UXY8 1006 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 KRT25Q7Z3Z0 450 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 DDX53Q86TM3 631 aaKnown RBP17.39■□□□□ 0.37
NME3-211ENST00000568561 TMEM143Q96AN5 459 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 ZNF274Q96GC6 653 aaPredicted RBP17.39■□□□□ 0.37
NME3-211ENST00000568561 RIPOR3Q96MK2 946 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 TRAIPQ9BWF2 469 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 INO80BQ9C086 356 aaPredicted RBP17.39■□□□□ 0.37
NME3-211ENST00000568561 MINDY3Q9H8M7 445 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 IFT122Q9HBG6 1241 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 GJB4Q9NTQ9 266 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 SORCS3Q9UPU3 1222 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 PCDHB2Q9Y5E7 798 aa17.39■□□□□ 0.37
NME3-211ENST00000568561 SRGAP2CP0DJJ0 459 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 QARSP47897 775 aaKnown RBP17.38■□□□□ 0.37
NME3-211ENST00000568561 RAB27AP51159 221 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 POLGP54098 1239 aaPredicted RBP17.38■□□□□ 0.37
NME3-211ENST00000568561 BMS1Q14692 1282 aaKnown RBP17.38■□□□□ 0.37
NME3-211ENST00000568561 PTPN14Q15678 1187 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 AGMOQ6ZNB7 445 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 TDRD5Q8NAT2 981 aaKnown RBP17.38■□□□□ 0.37
NME3-211ENST00000568561 OXER1Q8TDS5 423 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 SLC22A17Q8WUG5 538 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 CEP170P1Q96L14 293 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 PRRX2Q99811 253 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 KCNMB3Q9NPA1 279 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 AGPAT5Q9NUQ2 364 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 DZANK1Q9NVP4 752 aa17.38■□□□□ 0.37
NME3-211ENST00000568561 DBR1Q9UK59 544 aaKnown RBP17.38■□□□□ 0.37
NME3-211ENST00000568561 TDRD15B5MCY1 1934 aaKnown RBP17.37■□□□□ 0.37
NME3-211ENST00000568561 CCDC194A0A1B0GVG4 234 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 ZNF623O75123 536 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 DDHD2O94830 711 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 SKIP12755 728 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 PPP2R5CQ13362 524 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 UBXN11Q5T124 520 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 KIAA1841Q6NSI8 718 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 CPLX2Q6PUV4 134 aaKnown RBP17.37■□□□□ 0.37
NME3-211ENST00000568561 PRPF31Q8WWY3 499 aaKnown RBP17.37■□□□□ 0.37
NME3-211ENST00000568561 SLC7A3Q8WY07 619 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 LXNQ9BS40 222 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 PHF20Q9BVI0 1012 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 LIMD1Q9UGP4 676 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 IRAK3Q9Y616 596 aa17.37■□□□□ 0.37
NME3-211ENST00000568561 FAM205CA6NFA0 338 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 H0Y858 1186 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 POMCP01189 267 aa17.36■□□□□ 0.37
NME3-211ENST00000568561 LAMTOR4Q0VGL1 99 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms