RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SPICE1Q8N0Z3 855 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 NRBF2Q96F24 287 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 MTA3Q9BTC8 594 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 UPF3AQ9H1J1 476 aaKnown RBP13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 TLK1Q9UKI8 766 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 FRMPD1Q5SYB0 1578 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 ENO1P06733 434 aaKnown RBP13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 SERPINB3P29508 390 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 MECOMQ03112 1051 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 SEMA3FQ13275 785 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 PTPAQ15257 358 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 SPOPLQ6IQ16 392 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 PIK3R5Q8WYR1 880 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 CASP2P42575 452 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 STAT2P52630 851 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 TBC1D9BQ66K14 1250 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 JAMLQ86YT9 394 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 DNAAF3Q8N9W5 541 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 CCSER1Q9C0I3 900 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 WNT8AQ9H1J5 351 aa13.23□□□□□ -0.29
CSPG4P13-202ENST00000567704 PDS5AQ29RF7 1337 aaKnown RBP13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 PALLDQ8WX93 1383 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 CD58P19256 250 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 NAB2Q15742 525 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 SESTD1Q86VW0 696 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 HIC2Q96JB3 615 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 TRPV6Q9H1D0 765 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 KMT5AQ9NQR1 393 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 HESX1Q9UBX0 185 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 WARS2Q9UGM6 360 aaKnown RBP13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 BAG5Q9UL15 447 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 GNGT2O14610 69 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 KRT38O76015 456 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 TRIM49P0CI25 452 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 TRIM49CP0CI26 452 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 GNAT1P11488 350 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 SYNE4Q8N205 404 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 CCNYQ8ND76 341 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 SLC35G2Q8TBE7 412 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 FAF2Q96CS3 445 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 ANO3Q9BYT9 981 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 SLC13A1Q9BZW2 595 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 PAIP2BQ9ULR5 123 aaKnown RBP13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 H0YCG3 227 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 MYBL1P10243 752 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 PCYT1AP49585 367 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 CYTH1Q15438 398 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 KYNUQ16719 465 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 NUDCD3Q8IVD9 361 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 TMEM47Q9BQJ4 181 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 ERP44Q9BS26 406 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 TMBIM4Q9HC24 238 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZFATQ9P243 1243 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 HPSEQ9Y251 543 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 RIMS1Q86UR5 1692 aaKnown RBP13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 SUPT3HO75486 399 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 SRBD1Q8N5C6 995 aaKnown RBP13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 C3orf20Q8ND61 904 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 KCNB2Q92953 911 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 C11orf70Q9BRQ4 267 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 ATP6V0A4Q9HBG4 840 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 RHBDL2Q9NX52 303 aa13.22□□□□□ -0.29
CSPG4P13-202ENST00000567704 HNRNPCL1O60812 293 aaKnown RBP13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZBED4O75132 1171 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 ZBED1O96006 694 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 COPB2P35606 906 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 SOX5P35711 763 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 PASD1Q8IV76 773 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 GIMAP8Q8ND71 665 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 BTBD6Q96KE9 485 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 PHF20Q9BVI0 1012 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 FAM47DPA6NHR8 397 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 ATP6V1G2O95670 118 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 HIC1Q14526 733 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 GLG1Q92896 1179 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 RBM41Q96IZ5 413 aaKnown RBP13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 LZTS1Q9Y250 596 aa13.21□□□□□ -0.29
CSPG4P13-202ENST00000567704 PHF2O75151 1096 aa13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 TDP2O95551 362 aa13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 GGPS1O95749 300 aa13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 TARSP26639 723 aaKnown RBP13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 KCNJ1P48048 391 aa13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 HERVK_113P62684 666 aa13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 ST3GAL1Q11201 340 aa13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 CCDC92Q53HC0 331 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 FSCBQ5H9T9 825 aa13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 SNRNP27Q8WVK2 155 aaKnown RBP13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 DACT3Q96B18 629 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 INTS2Q9H0H0 1204 aaKnown RBP13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 CCDC68Q9H2F9 335 aa13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 DDX20Q9UHI6 824 aaKnown RBP13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 PLAGL2Q9UPG8 496 aa13.21□□□□□ -0.3
CSPG4P13-202ENST00000567704 L3MBTL1Q9Y468 752 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms